Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4462 |
Symbol | |
ID | 5750050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4883072 |
End bp | 4885345 |
Gene Length | 2274 bp |
Protein Length | 757 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641299564 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001565477 |
Protein GI | 160899895 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0705188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTGT TTGCGCGCGC CGGCTGTGGA TGCCGGCGGC ATGCGCCTGT GCCCGTTTTC ACCATGACTG CTTTCTTCTT CCCCGCGAAG CCGCTTCCCC GCCTTCGCCC GCTGCCGCTT GCCCTGAGCG CTGCCGCCTT CCTGTCCATG CCCGCACTGG CCCAAGGCCA GGATCCGTCC TCCGGCCCCG CCCCCGCCGC CGCCACCGCC GCCTCCGCTT CCCCGCAGGA GCAGGTGCTG CTGCCTGCCG TGGAAGTCGT GGGCCGAACG GCCTCGGGCG CCTATCACAC CGACGAGGCG GCCGGCGCCA AGACCGACCT GCCGCTGCGC GAGCTGCCGC AGTCGGTGCG CGTGATCACG CGCCAGGCCA TGGACGACCT GGGCGCCACC AAGCTTGACG ACGTGCTGGA CTACGTGGGC GGCGTCTCGC GCCAGAACAA CTTTGGCGGG CTGTGGGACA ACATCGTCAT CCGCGGCCTG CCCGGCGACC AGAACGTGGG CATGGCCACC CTGTTCAACG GTTTTTCCTC GGGGCGCGGC TTCAATGCGC CGCGTGATCT GGCCGGCGTG GAGCGCATCG AGTTCCTCAA GGGCACGGCC GCTGCGCTCT ACGGTAGCAG CGAGCCGGGC GGCACGCTGA ACGTCGTCTC CAAGCGCCCG CTGTGGACGT CTTCGCATTC CGTGGAAGCC TATGCGGGCA GCTACGGCCT GCGGCGTGGC GCGCTGGACA CCACGGGACC GGTGGGCGAG AACTTTGCCT ACCGGCTCAA CATCGCCGTG GAGGACCGCG ACAGCTTCCG CGATTTCGTG GGCGCCAGCC GCCAGGTGAT CGCACCGGCC TTCACCTGGA AGCTGGGGCG CGATACGGTG CTGGAGTACT CGGGCGAGCT GCTGCGCCAC AAGACGCCGC TGGACCGCGG CGTGGTGGCC GTGGGCGACC GGCTGGGCGC CATCTCGCGC AGCCGCTTCC TGGGCGAGCC GGGCGACGGC GATGTGACGG TGGAAAACCG CACCCACCAG TTCATCCTCT CGCACGAGTG GAACGCGCAG TGGCGCAGCC GCCTGGGCCT GTCCTATCGC GAAACCTCGA TCAACGGCTT TTCCACCGAA CCCCACGCGC TGCTGGCCAA TGGCGACCTC ACGCGCCAGC GGCGTTTCCG CGACTACCAG TCCGACGATA TCGCCGTGCA GGCCGAGCTG CAGGGCACGG TGAAAACGGG CGCCGTCGAA CACGAGCTGC TGCTGGGCCT GGAGAGCTTT CGCTTCGAGA TGGACACGCT GATGCTGCGC GCCAACCCGA CGGCGGCCAA TCCCTACGCC ATCAACATCT ACAACCCCAT CTACGGCGGC GCGCGCCCCG TGCCCACGGC CAACACCGAC ACCTTCGAGC GGCAGCGCAA CACGGCCTTC TACCTGCAGG ACGCCATCAA GCTCTCGCCC CAATGGCGCG TGGTGGCCGG CCTGCGCATG GACCGTTACG ACCAGTCGCT GCACAACCGC CGCACGGGGG CGACCACGCA GCAGGACCCG GCCTCGACCT CGCCGCGCTT GGGCCTGAGC TGGCTGCCGC TGCCGCAATG GACCTTCTAT GCCAACGCGG GCCGCTCGTT CCGGCCCAAC GTGGGCATCG ATGTGGCCGG TGCGGGCTTC AGCCCGGAAT CCGGCCGTTC CATGGAGCTG GGCGCCAAGT GGGAAAGTGC CGACCAGCGC ATGGGTGCCA CGGCCGCGCT GTTCGACATC CGCAAGCGCA ATGTGCTGAC GGCCGACCCG GGCAACGCCG GCTATTCGGT CTCGGCCGGC GAGATCCGCA GCCGGGGCCT GGAATTCGAC TTCGCCGGCC AGGTCACGCA GCGCTGGCGC CTGAATGCGA GCCTGGTGCT CAACGATGTA GAGATCTCCC GCGACAACAC GCTGGAGGTG GGCGGGCGCC TGCTCAACGT GCCCAAGGTC AACGGCAGCG TGCTGGCGGT CTACGAGAAC GCCTTCTCCA ACGGCCAGCG CTACGGCATC GGCGGCGGCG TCACCCACAT GGGCAAGCGC CTGGGCCAGG CCCGCACGCA GGCCGAGGCC GATGCCGGCA AGGCCGCCTT CGAGCTGCCC AGCTACACCA CGGCCAAGCT GGTTGCCTAC TGGCGCATCA GCCCCACGCT GCGCCTGACG CTGGACGTGG ACAACCTCTT CGACAAGACC TACTACACCA GCTCGTACAG CCGGCTGTGG GTGACGCCGG GCACGGCCCG CACCGTCACC GTAGGCCTTC AAGCAAAGTT CTGA
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Protein sequence | MSVFARAGCG CRRHAPVPVF TMTAFFFPAK PLPRLRPLPL ALSAAAFLSM PALAQGQDPS SGPAPAAATA ASASPQEQVL LPAVEVVGRT ASGAYHTDEA AGAKTDLPLR ELPQSVRVIT RQAMDDLGAT KLDDVLDYVG GVSRQNNFGG LWDNIVIRGL PGDQNVGMAT LFNGFSSGRG FNAPRDLAGV ERIEFLKGTA AALYGSSEPG GTLNVVSKRP LWTSSHSVEA YAGSYGLRRG ALDTTGPVGE NFAYRLNIAV EDRDSFRDFV GASRQVIAPA FTWKLGRDTV LEYSGELLRH KTPLDRGVVA VGDRLGAISR SRFLGEPGDG DVTVENRTHQ FILSHEWNAQ WRSRLGLSYR ETSINGFSTE PHALLANGDL TRQRRFRDYQ SDDIAVQAEL QGTVKTGAVE HELLLGLESF RFEMDTLMLR ANPTAANPYA INIYNPIYGG ARPVPTANTD TFERQRNTAF YLQDAIKLSP QWRVVAGLRM DRYDQSLHNR RTGATTQQDP ASTSPRLGLS WLPLPQWTFY ANAGRSFRPN VGIDVAGAGF SPESGRSMEL GAKWESADQR MGATAALFDI RKRNVLTADP GNAGYSVSAG EIRSRGLEFD FAGQVTQRWR LNASLVLNDV EISRDNTLEV GGRLLNVPKV NGSVLAVYEN AFSNGQRYGI GGGVTHMGKR LGQARTQAEA DAGKAAFELP SYTTAKLVAY WRISPTLRLT LDVDNLFDKT YYTSSYSRLW VTPGTARTVT VGLQAKF
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