Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4445 |
Symbol | |
ID | 5750033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4866284 |
End bp | 4867153 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641299547 |
Product | protocatechuate 4,5-dioxygenase subunit beta |
Protein accession | YP_001565460 |
Protein GI | 160899878 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.241927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.176691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCA TCACCGCATC CGTCTACACC TCGCATGTAC CCGCCATCGG CGCGGCCATG GACCTGGGCA AGGCCGACGA GCCCTATTGG CAGCCTTTGT TCAAGGGCTT CGAGCACTCG CGCCAATGGC TCAAGGACAA CAAGCCCGAC GTGATCTTCC TGGTCTACAA CGACCACGCG ACCGCGTTCA GCCTGGACTT CATCCCGACG TTTGCCATCG GCACGGCCGC TGAATACCAG CCCGCCGACG AAGGCTGGGG CCCGCGCCCC GTGCCCAAGG TCGTCGGCCA TCCGGAGCTG GCCAGCCACA TCGCGCAGTC GGTGATCCAG CAGGACTTCG ACCTCACCAT CGTCAACAAG ATGGACGTGG ACCACGGCCT GACCGTGCCG CTGTCGCTGA TGTGCGGCGA GCAGGACGCG CGCACGGGCG CCTGGCCCTG CCCGGTGATT CCGTTTGCCG TCAACGTGGT GCAGTACCCC GTGCCGTCGG GCCAGCGCTG CTTCAACCTG GGCCGGGCCA TCCGCCGCGC CGTGGAAAGC TTCGACGAAG ACCTGAACGT GCAGATCTGG GGCACGGGCG GCATGAGCCA CCAGTTGCAG GGCGCGCGTG CGGGCCTGAT CAACAAGGAG TGGGACAACC GCTTCCTGGA CCTGCTGATC GAGAACCCGG CCGGCCTGGC CAAGATGCCG CATATCGACT ACGTGCGCGA GGCCGGCTCC GAAGGCATCG AGCTGGTGAT GTGGCTGATC GCGCGCGGCG CCATGGCCGA TGTGGATGGC CCCGCGCCGC TGCCCAAGGT CAACCACCGC TTCTACCATG TGCCCGCGTC CAATACGGCC GTGGGACATC TCATCCTGGA GAACGGCTGA
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Protein sequence | MARITASVYT SHVPAIGAAM DLGKADEPYW QPLFKGFEHS RQWLKDNKPD VIFLVYNDHA TAFSLDFIPT FAIGTAAEYQ PADEGWGPRP VPKVVGHPEL ASHIAQSVIQ QDFDLTIVNK MDVDHGLTVP LSLMCGEQDA RTGAWPCPVI PFAVNVVQYP VPSGQRCFNL GRAIRRAVES FDEDLNVQIW GTGGMSHQLQ GARAGLINKE WDNRFLDLLI ENPAGLAKMP HIDYVREAGS EGIELVMWLI ARGAMADVDG PAPLPKVNHR FYHVPASNTA VGHLILENG
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