| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4436 |
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| Symbol | |
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| ID | 5750024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4857286 |
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| End bp | 4858437 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641299538 |
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| Product | porin |
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| Protein accession | YP_001565451 |
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| Protein GI | 160899869 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.412738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAGC AAATGCACCA GACACCGCGA GTGCCGCAGC GCGGGGCCCT TCGCATCCTG
GCCCTGACCA CCGTGCTGGG CGCCTGGGGC GCGGGTGCCC ACGCCCAGTC CTCGGTCACC
ATCTACGGCA GCGTGGACCA GTACATCAAC CACATGCGCA GCAGCTCGGG CGCATCCATG
ACCACGCTGG AGGACGGTGC CCTGCTGCGC AGCCGCCTGG GCTTTCGCGG CCACGAAGAC
CTGGGCGGCG GCCTGTACGC GAAGTTCCAG CTGGAGATGG GCATCAACGC CGACAACGGC
ACGCAGGCCG ACAGCACGCG CGGCTTCGAC CGCCAAAGCT GGGTGGGCCT GGGCGGCGGC
TGGGGCGAGG TGCGGCTGGG CCGGCAGAAC ACCGTGATCT TCGGGCGCGG CGACTACATC
GACTTCACCT CGCGCACGTT GGGATCGATG GTCAACAACT TCGGCGTGCC CTCGCGCTTC
GACAACGACA TCTCCTACAC CTCGCCGCGC ATGGCCGGCT TCCTGTTCGA GGCCCACTAC
GCCATGGCCG AAACGGGCGC TCCCGCACGG CAGGCCATCT ACCAGCTGGG CCTGGACTAC
CTGAACGGCC CCTACCGCGT GGGCTATGCC GGGCTGTATG CGCGTGCGCC GCAGAACGCG
GCCTATACCG ACGCGGTCCG CTACGACAAC CTCTACGCCA ACTACGACTA CGGCAAGGGC
AAGGTCCAGC TGGCCTTTGT GCGGTCCAAC AACAGTACGG CGGGCTCGGC GGGCAACAAC
ACGGGCACGG TGCTGGGCAA TGTGGGCGGG CTGGTGGCGG GCACGAATGC CGATGTGCGC
CGCTTCTACC GCGTCTGGCA GCTGTCGGCC GACTACCGCG TGACGCCGCA GCTGCGCGTG
GGCGCACTGT GGGGCCGCAT ACAGGATGGC TCGGACAGCG GGCGCGGCGC ATCGGGCGGC
GCGGTCGCGG CCTACTACGA CCTGTCCAAG CGCACCATGC TCTACGCGGT GGCCGAGCAG
TTGAAGAACG ACCGCAATGC GGGCTTTAGG CTGGCGGCCT CGGGCGGCAT GAAGCCCAAC
TTCACATCGG CCGACGACGT CAACGGCCGC ACCATCAAGG GCGTGCAGCT GGGCGTGCTG
CACCGCTTCT GA
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| Protein sequence | MQQQMHQTPR VPQRGALRIL ALTTVLGAWG AGAHAQSSVT IYGSVDQYIN HMRSSSGASM
TTLEDGALLR SRLGFRGHED LGGGLYAKFQ LEMGINADNG TQADSTRGFD RQSWVGLGGG
WGEVRLGRQN TVIFGRGDYI DFTSRTLGSM VNNFGVPSRF DNDISYTSPR MAGFLFEAHY
AMAETGAPAR QAIYQLGLDY LNGPYRVGYA GLYARAPQNA AYTDAVRYDN LYANYDYGKG
KVQLAFVRSN NSTAGSAGNN TGTVLGNVGG LVAGTNADVR RFYRVWQLSA DYRVTPQLRV
GALWGRIQDG SDSGRGASGG AVAAYYDLSK RTMLYAVAEQ LKNDRNAGFR LAASGGMKPN
FTSADDVNGR TIKGVQLGVL HRF
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