Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4416 |
Symbol | |
ID | 5750004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4832154 |
End bp | 4833146 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641299519 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_001565432 |
Protein GI | 160899850 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.343651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCGCG TGAACAAGCG TCGTTTCCTG CTGGCCGGCC CTTCCCTGCT GGCCGCTGCC GCCCTGGCTT CCACCACCGC CGCGCGGGCT GCGGCCGACC CCAGGACCCG ATTGGTCGTC GCCGACCAGA GCGAGCTGCT GCGCCACCTG CTGGATGCCA GCGGCGAGCG CAAGCGCCTG GGCTTTCAGC TGGAGCTGCC CAACTTCGCG GGCGGCCCGG CCATCTTCGA GGCCATACGC GCAGGCGCGC TGGACATTGC CTATGTGGGC GACACGCCGC CCATCCAGGC GCGCGCCGCC GGCGTGCAGC TGCCCATCAT CGCCACCTTC ACGCGCGAGC GCGCCCAGTA CCGGCTGGTG CAGCGCGCCG ATGCAGGCAT AGAGCGCCTG GCCGACCTGC GCGGCAAGCG CCTGAGCTAT GTGGAAGGCT CGGGCCGCCA GGTCTTCCTG ATCGAGGCAT TGACACGCGC GGGCCTGACG CTGGCCGACG TGAAGCTGGT CAACCTGCGC GTGGCCGAAC TCAACGACGC GCTGCGCGCC AAGGCCGTGG ACGTGGCCGT GCTCATGGAG CCCCATGTCA CGCGCCTGGG CAAGCAGATC GGCGCGCGGC CCGTGCCCGA TCCGCAGGAG CGCACGCTGC TGCCCGCCAC CTCGTACATC TACGCACGGC CCGACGTGCT GGCCGACCCG GCCAAGTCCC AGGCCATCGT CGATTTCCTG GGCGCCTTCG TGCGCGCAGG CAAGTGGAGC AATGGCCACG AGCAGGAATG GGGCCGCCAC TACTACACGC AGTTCCAGCG CATCGATGCG GAGAGCACGG CGGCCATCCT GGCATCGCAG TCCGACCTGC TGTTCCAGAC GGCCGCCGAG GCGCAACCCC ACCACCAGAA GCTGATCGAC ATCCTGCACG CCGCCGGCAG CCTGCCCCAG CGGCTGGATG CGGCCGGCTC CTTCGTGTCC ACCTACGACC GCGTGATCGT GGCCAACCGA TGA
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Protein sequence | MERVNKRRFL LAGPSLLAAA ALASTTAARA AADPRTRLVV ADQSELLRHL LDASGERKRL GFQLELPNFA GGPAIFEAIR AGALDIAYVG DTPPIQARAA GVQLPIIATF TRERAQYRLV QRADAGIERL ADLRGKRLSY VEGSGRQVFL IEALTRAGLT LADVKLVNLR VAELNDALRA KAVDVAVLME PHVTRLGKQI GARPVPDPQE RTLLPATSYI YARPDVLADP AKSQAIVDFL GAFVRAGKWS NGHEQEWGRH YYTQFQRIDA ESTAAILASQ SDLLFQTAAE AQPHHQKLID ILHAAGSLPQ RLDAAGSFVS TYDRVIVANR
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