Gene Daci_4393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4393 
Symbol 
ID5749981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4809815 
End bp4811929 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content65% 
IMG OID641299496 
Productmetallophosphoesterase 
Protein accessionYP_001565409 
Protein GI160899827 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCT GGAAATTGGG AATGGTGGCC GGTGCCGCAG CGCTGGTCCT GGCGGGTTGC 
GGTGGCAGCG ATGGCGATAG GGCAGATGGG GGAACGAACA GCCAGGCCGT GGCCTTCATG
GCCGATGTGC ACTTCCAGGA TGTGTACGGC GACCTCAAGA ACAGCAGCTT CAAGGGCGTG
CCCACCGCCA ATGGCATGTT CGCCACCATC CGCACCATGT ATGCGCAGCT GACTTCCACG
CGGCTGTTCA ACGAGAACTA CTTCGCCTTC CGCGCCGCGC TGGACGATTC GCTGGCCAAG
GGCGTGAAGC TGGTGGCCTT TCCCGGCGAC TTCTCCGACG ACGGCCAGCC GCTGAACGTG
AACGGCTTTC GCGCCGTGCT GGCCGAGTAC GAGAAAAAGG GCATGCGCTT TTTCATCGCG
CCCGGCAACC ATGACCCTGT CGCCCCCTAC GACGACGACG AAAAGGGCAA GGACGACTTC
ATGGCCGCCA ACGGCAGCAC GGTCAAGGTC TACGCCAAGA ACTACCAGGG CTGCCTGAAC
GCCGAAGCCA ACGTGGTCTG TACCGACCAG TTGATGGAGC AAGGCTATGC CTCGCTGCTG
CGCGACCTGG CCCCCTACGG CCTGATGCCC AATGAGAAGG ACGTGTACTG GGAGACCCCC
TACAGCACCT ACGCGCAGGA CAAGTACAGC TATGCCGAGG CGGCCAGACA GGCCCAGCTG
GGCCAGCGCA GCTACGAGAT CTGCAAGGAA GGCGAAGGCG GCAGGTTCAA GCAGGCCGGC
TACACCAATT GCACCAGCAT TGCCGATGTG AGCTACCTGG TCGAGCCCGT CAAGGGCCTG
TGGCTGCTGT CGGTGGACGC CAACGTCTTC GTGCCGGACA AGCTGGACCC CGCCAAGCCC
AACTCGCCCA AGGGCTTCAC CGGCGCCGGC AATGCAGGCT GGAACAAGAT GACCACGCAC
AAGAAGAGCG TGATGGCGTG GATCGAATCG GTGAGCGCGC GCGCCAAGGC CCAGGGCAAG
CAGCTGGTGG CCTTCTCGCA CTACCCGACC ATGGACTTCT ACGCCAACCA GACCGATGCC
ATCAAGGCCG CCTTCAAGCC CGGCGCCTTC CAGACGGCGC GGGTGCCCGA GCAGGCCACG
GCCGAGGCGG TGGCCGCCAC GGGCCTGCCG CTGCACATCG GCGGCCACAT GCACTTCAAC
GGCACCAACG ACTACCTGAG CAAGAGCGGC AAGTACCTGG TGAACGTGCA GTCGCCGTCG
CTGGCCGTCT ATGGCGCGGC CTACAAGATC GTGCGCTTCG ACACGCCGCG CAAGGTGGAC
GTGCAGACCG TGGCGCTGAA CAACGTGCCG CGCTTCAACG AGCTCTTTCC GCTGTACGAG
ATGGAATGGA AGTACGTGGA AGGCAGCAGC AAGCCCGAGG ACGCCAAGCG CCGCTGGGAC
AAGGCCATTC TGTCCAGCAC CAGCTATGGC GACTTCACCA GCCGCTACTT CGGCGAGCTG
TCGCGCCTGC GCTTCCTGGA CGAGTACTGG GCCTGCGACA TGAAGGACCT GGTCAGCCAG
CTCAACCTGC AGCAGATGCT GACCATGGCC CAGCTGGACA CCAAGGTCAC CTACGCCCAG
CTCGCCGGCC TGGCCGCGCA AGGCGTTGCC GTGCCGTTCA AGCCCAGCGC CGGCTGCCTG
CAAGGCAGCC CCGTGGCCGG CAATGCCGCG CAGTGGGCCG CCGACTGGAG CGTGGCCGAG
AACGCCGCCC GCGCCAAGGC CCAGGCCGCG GGCGTGGACT TCAACGCGCT GGCCAAGGTG
TCGGCCTATA CCTTCTACGG CGACTTCCAC CGCACCGTCT ACGCGGGCGG CCTGTCGCTG
AACGACATGG GCAAGCAGCG CGTGGAGCAG TACCGCCTGC TGATGAGTGC CTTCCCTGCC
CTGACCTCGG CGCCCCAGAA AACAGGCGAC AAGCTGGCCG ACAGCACGCC CGTGGGCCAG
CCCTTCCAGT ACAGCTTCAA GCAGGTGTTC TCCATCCTCA AGGGCCTGGG CTCGGGCAAG
CCCAGCGACC ATTTCTCGGT GGACTTCGAC GCCAGGACGC TGCGCGCCGA AGGCAGCGAC
AGCCTGAAGT TCTGA
 
Protein sequence
MQVWKLGMVA GAAALVLAGC GGSDGDRADG GTNSQAVAFM ADVHFQDVYG DLKNSSFKGV 
PTANGMFATI RTMYAQLTST RLFNENYFAF RAALDDSLAK GVKLVAFPGD FSDDGQPLNV
NGFRAVLAEY EKKGMRFFIA PGNHDPVAPY DDDEKGKDDF MAANGSTVKV YAKNYQGCLN
AEANVVCTDQ LMEQGYASLL RDLAPYGLMP NEKDVYWETP YSTYAQDKYS YAEAARQAQL
GQRSYEICKE GEGGRFKQAG YTNCTSIADV SYLVEPVKGL WLLSVDANVF VPDKLDPAKP
NSPKGFTGAG NAGWNKMTTH KKSVMAWIES VSARAKAQGK QLVAFSHYPT MDFYANQTDA
IKAAFKPGAF QTARVPEQAT AEAVAATGLP LHIGGHMHFN GTNDYLSKSG KYLVNVQSPS
LAVYGAAYKI VRFDTPRKVD VQTVALNNVP RFNELFPLYE MEWKYVEGSS KPEDAKRRWD
KAILSSTSYG DFTSRYFGEL SRLRFLDEYW ACDMKDLVSQ LNLQQMLTMA QLDTKVTYAQ
LAGLAAQGVA VPFKPSAGCL QGSPVAGNAA QWAADWSVAE NAARAKAQAA GVDFNALAKV
SAYTFYGDFH RTVYAGGLSL NDMGKQRVEQ YRLLMSAFPA LTSAPQKTGD KLADSTPVGQ
PFQYSFKQVF SILKGLGSGK PSDHFSVDFD ARTLRAEGSD SLKF