Gene Daci_4381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4381 
Symbol 
ID5749969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4798734 
End bp4799249 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content69% 
IMG OID641299484 
Productprotein tyrosine phosphatase 
Protein accessionYP_001565397 
Protein GI160899815 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCG ACAAACCCCT GAACGTCCTG TTTCTGTGCA CGCACAACTC TGCCCGGAGC 
ATCCTGGCGG AAGGCCTGCT GAATCACCTC GGCGGCGGGC GCTTCAAGGC CTACTCCGCA
GGCAGCAGCC CCCGCGACAA CCAGCAGCCC CATCCGATGG CGATTGCGGC GCTGGAGCAG
GCGGGCGTGT GCACCGAAGG CCTGCGCAGC AAAAGCTGGG ATGAGTTCGG TGCGCCCGAT
GCACCCCCTA TGGACCTGGT CATCACCGTC TGCGACAGCG CCGCTGGCGA GGCATGCCCC
TATTGGCCGG GCCAGCCCGC CACCGCGCAC TGGGGCTACG CGGACCCGTC GCGGGCCGAA
GGAAGCGACG AAGGCAGCGA CGAAGGCCGG CAGGCCGCAT TCCGCCAGAC CCTGCTGGCC
ATGCGGCAGC GCCTGGAGCG GCTCGTCAAC CTGCCGCCAT CGTCCCTGGC CAGGCATGCG
CTGCAGCAGT CTGCCCGCGA CCTGGCCCGT GACTGA
 
Protein sequence
MTSDKPLNVL FLCTHNSARS ILAEGLLNHL GGGRFKAYSA GSSPRDNQQP HPMAIAALEQ 
AGVCTEGLRS KSWDEFGAPD APPMDLVITV CDSAAGEACP YWPGQPATAH WGYADPSRAE
GSDEGSDEGR QAAFRQTLLA MRQRLERLVN LPPSSLARHA LQQSARDLAR D