Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4353 |
Symbol | |
ID | 5749941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4767478 |
End bp | 4768770 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641299456 |
Product | allantoate amidohydrolase |
Protein accession | YP_001565369 |
Protein GI | 160899787 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.243938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.131907 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCC TGCCCGCTTC CTCCGCCCCC AACCTTCCCC CCATCAATGC CGAGCGCCTG TGGCGCCGCG TGGAGACCCT GTCCACCTTC ACCCTGCCCG ACGTGCCGTG GACGCGCCGC GCCTTCTCCC CTGAATTTGA CCAGGCCCGC GCCTGGCTGC GCGGGCAGTT CGAGGCAGCG GGCATGCAGG TCCATCTGGA TGAAGGCGGC AACCTGATGG GCCGCCTGCC GGCTGCCCCA GGCCCGGTGC AACGCGCCCC CATCTCCACC GGATCGCACT GCGACACCGT GATGATGGGC GGGCGCTTCG ACGGCATCAT CGGCGTGCTG GCCGGCATCG AGGTCGCGCA CTGCCTGCAC GAAAACGGCA TCGCCCTGCA GCACCCGTTC GAGGTGATCG ACTTCCTGTC CGAAGAACCC AGCGACTATG GAATCTCCTG CATAGGCAGC CGCGCACTGT CGGGCAAGCT GGACGCCGCC ATGCTGGCCG CCCGCAACCC CGAGGGCGAA ACCCTGGCCG AAGGCATGCG CCGCATCGGC GCGCGGCCCG AGGCGCTGGA CCGCCCGCTG CGCAGCGCCG GCGGCACGGC CGCCTTCGTG GAGCTGCACA TAGAGCAGGG CCCGGTGCTG GAGCGGCGCG GCCTGCCGAT CGGCGTGGTG ACGAACATCG TGGGCATCCG CCGCGTGAGC TTCACCGTGC GCGGCCAGGC CGACCACGCA GGCACCACGC CCATGGACAT CCGCCAGGAC GCGCTGGTGG GCGCGGCGCG CATCGTCGAT GCGGCCAACC GCAAGGCCGC TGCGCTCAGC GGCCAACCCC ACTATGTGGT GGCCACCGTG GGCCGGCTAT CGCTCACGCC CAATGCCTCC AACGCCGTGC CCGGCCTGGT CGAGATGATG ATGGAAGTGC GCAGCGACCA CGCGGGCGTG CTGGAGCGCT TCCCCGAGGA ACTGCTGGCC GAAGTCCTGC CCGGCCTGGC CGCCTTGCGC GTGCGCGCCG AGATGTCCGA CGTGAGCCGC TCCCGGCCCA CGGACTGCGC TGGCCTGGTC ATGCAGGGCG TGGAGCAGGC CTGCGCAAAC CTGGGCTACG CCCACATGCG CATGCCCAGC GGCGCCGGCC ATGACGCCGT CTACATGGCG CCCACCGGCC CCATGGGCAT GATCTTCATC CCCTGCCTCC ACGGCCGCAG CCACGCGCCC GAGGAGTGGA TAGAACCCGC CCAGCTGCTG GACGGCACGC GCGTGCTGTA CGAGACGGTG CGCGTGCTGG ACAGGCAGTT GGCGCAGGGC TGA
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Protein sequence | MTALPASSAP NLPPINAERL WRRVETLSTF TLPDVPWTRR AFSPEFDQAR AWLRGQFEAA GMQVHLDEGG NLMGRLPAAP GPVQRAPIST GSHCDTVMMG GRFDGIIGVL AGIEVAHCLH ENGIALQHPF EVIDFLSEEP SDYGISCIGS RALSGKLDAA MLAARNPEGE TLAEGMRRIG ARPEALDRPL RSAGGTAAFV ELHIEQGPVL ERRGLPIGVV TNIVGIRRVS FTVRGQADHA GTTPMDIRQD ALVGAARIVD AANRKAAALS GQPHYVVATV GRLSLTPNAS NAVPGLVEMM MEVRSDHAGV LERFPEELLA EVLPGLAALR VRAEMSDVSR SRPTDCAGLV MQGVEQACAN LGYAHMRMPS GAGHDAVYMA PTGPMGMIFI PCLHGRSHAP EEWIEPAQLL DGTRVLYETV RVLDRQLAQG
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