| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4340 |
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| Symbol | |
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| ID | 5749928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4751210 |
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| End bp | 4752187 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641299443 |
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| Product | Ku protein |
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| Protein accession | YP_001565356 |
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| Protein GI | 160899774 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1273] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00918042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGAAAG CCGCCTCCCC CAAATCCAGC CCGTCCACCT CCGCGCGCAG CATGTGGAAG
GGCGCCATCA GCTTTGGCCT GGTGCACATT CCCATCGGCC TGTACGCGGC CACGGCCAGC
TCGGACATCG ACTTCGACTG GCTGGACAAG CGCAACATGC AGCCCGTGGG CTACAAGCGC
ATCAACAAGG TCACGGGCAA GGAAGTGGCC ACGGCCGACA TCGTCAAGGG CGTGGAATTC
GAAGAAGGCC GCTACGTGGT GCTGAGCGCT GAAGAGATTG CCGCCGCCTT TCCCAAGACC
ACGCAGACCA TCGAGATCGA GGCCTTTGTC GATGCCCAGG ACATCCCCTT CATCTACCTG
GAACGCCCCT ACTACACCGC CCCCCTGCAC CGTGGCCAGA AGGTCTACGC CCTGCTGCGC
GAGGCCCTGC GCAAGAGCAA CAAGGTGGGC GTGGCCAAGG TGGTCATCCA GACCAAGCAG
CACCTGGCCA TCCTGATTCC CTGCGGCCGG GCGCTGGTGC TGAACCTGCT GCGCTGGGGC
GGCGAGATCC GCTCCTTCGA GCAGCTGGAC CTTCCGCCGC TGGACGCCAA GGCCGCCGGC
ATCAAGAGCG CCGAGATGAC CATGGCCATG GCCCTCATCA AGGACATGAG CCAGGCCTGG
GACGCCGACC AGTTCCGCAA CTCCTTCAGC GAGGAAATCC ACCAGCTCGT GCAGGCCAAG
GCGCATGCGG GCGATGTGCA AAACGTGGAA AAACAGGAGA CCACACCCGC CGCGCCGGCC
AACGCGGCCG TGCTGGACCT GACGGCCCTG CTCAAGAACA GCCTGGGCAA GGGCGCAGGC
GGACCATCCG CCACCGCAGC CAAGGAAAAA AATACCGCGT CAACGGTAAA AAATGCAAAG
ACCCCAGCGC CCAGAAAATC GACAAAATCC ACAAAAAACC CGGCCAGGGC CCCTGCAAAA
CGCCCCGCCG CCAAATAA
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| Protein sequence | MKKAASPKSS PSTSARSMWK GAISFGLVHI PIGLYAATAS SDIDFDWLDK RNMQPVGYKR
INKVTGKEVA TADIVKGVEF EEGRYVVLSA EEIAAAFPKT TQTIEIEAFV DAQDIPFIYL
ERPYYTAPLH RGQKVYALLR EALRKSNKVG VAKVVIQTKQ HLAILIPCGR ALVLNLLRWG
GEIRSFEQLD LPPLDAKAAG IKSAEMTMAM ALIKDMSQAW DADQFRNSFS EEIHQLVQAK
AHAGDVQNVE KQETTPAAPA NAAVLDLTAL LKNSLGKGAG GPSATAAKEK NTASTVKNAK
TPAPRKSTKS TKNPARAPAK RPAAK
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