| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4261 |
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| Symbol | |
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| ID | 5749849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4661951 |
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| End bp | 4665337 |
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| Gene Length | 3387 bp |
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| Protein Length | 1128 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641299364 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001565277 |
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| Protein GI | 160899695 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.172796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAC AGGACATCCT GCTGGAGCCG CCGCCCCCGC AGCTGCAGCG GCTGCAGCCC
CCGCCCCAGG CCACCGGGCC GGTGTCCGGT ATGGCATCGG GCCCGGGCCT GCCCGGCTAT
GCGGAGCTGC ACTGCCTGTC GAACTTCAGC TTTCTGCGCG GCGCCTCTTC GCCCGCCCAA
CTGGTGCAGC GCGCCAAGGC CCTGGGCTAC CAGGCGCTGG CCCTGACCGA CGAATGCTCG
GTGGCCGGCG CCGTGCGCGC CTTCGAGGCC GCGCGCGACT GCGAGATGGC GCTGATCCAT
GGCAGCGAAT TCGCCTGGGG CTCGCTGCGC GTGGTGGCGC TGGCGCGCGA TCTGAACGGC
TGGGGCAACC TCTGCGAATT CATCAGCGCG GCGCGCGCCC GTGCCGAAAA GGGCCGGTAC
CTGGTCGATG CCGACAGCCC CTGGCATCTG CTGCGTGAAG GCTGCGAATG CATCGTTGTG
CCGCAGCGTG CGCAGCTGTT GCCCGGCGAT GTGCCCGCCA TGGCCGAGGC CGTGCAGGCC
GCCGTGGCGC AGCTGGGGCC GGGCTGCTGG CTGGGCGTGG AGCTGCTGCT GGCTCCAGAC
GACAGCCTGT GGCTGCAAAG CCTGCAGGAC GTGGCAGGGT TGCTGGGCCT GTCCTGCGTG
GCCTGCGGTG ATGTGCACAT GCATGCGCGC TCGCGCAAGC CGTTGCAGGA CCTGGTGACG
GCGCTGCGCC TGGGCTGCAC GGTGGCCGAG TGCGGCTTCG AGCTGCACCC CAATGCCGAG
CGGCATCTGC GCTCGCGCTT GCGGCTGGGC GGCATCTATC CACGTGCCAT GCTGGATGCA
ACCTTGCAGA TTGCCGCGCG CTGCGATTTC AAGCTCAGTG AGATCAGCTA CCACTATCCG
CAGGAAAGCG TGCTGCCCGG CATGGATGCA CGCCAGACCC TGGCCTGGCA TACCTGGCAG
GGAGCGGCGG GGCGCTATCC CGAAGGCATT CCCAAGAAGG TGCGCAAGCA ATTGCACAAC
GAGTTGAAGC TGATCTCCAT GTGCGGCTAC GAGATGTACT TCCTCACCGT GCACGACATC
GTGCGATTCG CTCGCAGTCA GGACATCCTG TGCCAGGGCC GGGGTTCGGC CGCGAACTCG
GTGGTCTGCT TCTGCCTGGG CATCACGGCC GTCGATCCCA CCCTGCAGAC GCTGTTGATC
GCGCGCTTCA TCAGCCGCGA GCGCAGCGAG CCCCCAGATA TCGACGTGGA CTTCGAGCAC
GCGCGGCGCG AGACCGTCAT CCAGTACATC TACGAAAAAT ACGGCCGTGA CCGTGCGGCG
CTGACGGCCG TGGTCAGCTG CTGGCGCACG CGTGGCGCAC TGCGCGACGC GGGCAAGGCC
CTGGGTGTGG ATGCGGCGCT GATCGACGCC ATGGCCCGGC AGCACCACTG GTTCAGCGAT
GCCGAGGACC AGGCGGCCGA GCCGGAGCCC GAACCCGATG ACCCCGCCCT GGGCTGGGTG
CGCTCCAAGC TGCTGCGCCT GGCCCGGCTG CGCGAGCGGC TGGGCGACGA CTGCCCGCAA
CTGTCGCCCC AGCGTGCGCG GCTGTGGCTG GAGCTGGCCT TGCAGCTGCG CGACAGCCCG
CGCCACCTGA GCCAGCACGT GGGCGGCTTT GTGCTGACCG ACGGGCCGCT GACGCGGCTG
GTGCCCGTGG AGCCGGCCGC CATGGAGGGC CGCTCGGTCA TCCAGTGGGA CAAGGACGAT
CTGGACACCA TGAATCTGCT CAAGGTCGAT GTGCTGGCCC TGGGCATGCT CACCGTGCTG
CGCGGCAGCC TGAAGGCACG CGCCGCGCTG CGCGGGCCGC GCTGGGAGCT GGCCGACATC
CCCAAGGAGG ACGCCGCCAC CTACGACATG ATCTGCCGCG CCGACACCGT GGGCACCTTC
CAGATCGAGA GCCGCGCGCA GATGAGCATG CTGCCCCGGC TGCGGCCGCG CGTGTTCTAC
GACCTGGTGG TCGAGGTCGC CATCGTGCGG CCCGGCCCCA TACAGGGCGG CATGGTCCAT
CCCTATCTGC AGGCGCGCGA GCGTCGGCGG CAGGGCGGCG AGCTGGTCCT GGAAAAGCCC
GCGCTCGAGA AGGCGCTCAA GCGCACGCTG GGCGTGCCCA TCTTCCAGGA GCAGGTGATG
CAGATCGCCA TGATTGCGGC AGATTTCTCG GCGGGAGATG CCGACGAGCT GCGCCGCTCC
ATGGCCGCCT GGCGGCGCAA GGGCGGCGTG CACCGCTTTG AGCGCCCATT GATAGACGGC
ATGCTGGCCA ACGGCTACAG CGCCGAATTT GCCCAGGCCA TCTTCCGCCA GATGCTGGGC
TTCGGCGAAT ACGGCTTCCC AGAAAGCCAT GCCTACAGCT TCGCCATGCT GGCCTATGCC
AGCGCCTGGC TCAAGCGCCA TGAGCCGGCC TGTTTCCTCA TGGCCTTGCT CAATGCCCAG
CCCATGGGTT TCTACACCCC CTCGCAGCTG ATCCAGGACG CGCGCCGCCA CGGCGTGCGC
GTGCTGCCCG TCGATGTGCG CCACAGCGAC TGGGACTGCA CGCTGGAGGC GCCGCACGAG
CGCATTGCCG GCGTCGAGCT GCCGCAGCCG GCCGTGCGCC TGGGTCTGTG CATGGTGGCG
CAGTTGCCAA AGACTTCGGG CGAGCGCGTG GCGCAGGTCC GCGCGCAGGC GCCGTTCAGG
AGCACCGAGG ACCTGGCCCT GCGCGCCCGG CTGCAGCGCG CCGAGCTGCA GGCCCTGGCG
GCGGCCGATG CGCTGCAGGG CCTGTCAGGC CACCGCCGCC AGCAGATGTG GGATGCGGCG
GCCCTGCAGG TGCAGCCGCC GTTGTTCGCG GGCGTGCCCG TGCACGAGGC GCCCGTGCAA
CTGGCCGCCG CGCCCGAGGG CGAGGAAATC CTGTTCGACT ACGCGGCCAC GGGCCTGAGC
CTGCGCCGCC ATCCGCTGGC CCTGCTGCGT GACCGCCTGC GCCGCCACGG GCTGCGCACG
GCGCTGGAGC TGCGCGACAC GCTGGCGGGC ATGCGCGTGC GGGCCTGCGG CATCGTCACC
GTGCGCCAGC GCCCGCCCAC GGCCAAGGGC ACCCTCTTCA TCACGCTGGA GGACGAGACG
GGCACGGTCA ACCTGGTGGT CTGGCCCGAT ACCGTCACGC GCTGGGGCGA GCCCTTGCTG
GGCGCGCGGC TGCTGGCGGT GGAGGGCATC TGGCAAAGCA GCTCGGATTG GGGCGGCGGC
AAGGACTGCG GCGAGCCAGC GCCTGCAGAG CAGGCCAGCC AGGAGGTGCC CGCCGTGCGC
CATCTCATCG TGCACCGCGC CCGCGACATG AGCCGCTGGC TGGGCCGCCT GGGCGGCGCC
GGCGTGGCAA GCCGCAATTT CCACTGA
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| Protein sequence | MAEQDILLEP PPPQLQRLQP PPQATGPVSG MASGPGLPGY AELHCLSNFS FLRGASSPAQ
LVQRAKALGY QALALTDECS VAGAVRAFEA ARDCEMALIH GSEFAWGSLR VVALARDLNG
WGNLCEFISA ARARAEKGRY LVDADSPWHL LREGCECIVV PQRAQLLPGD VPAMAEAVQA
AVAQLGPGCW LGVELLLAPD DSLWLQSLQD VAGLLGLSCV ACGDVHMHAR SRKPLQDLVT
ALRLGCTVAE CGFELHPNAE RHLRSRLRLG GIYPRAMLDA TLQIAARCDF KLSEISYHYP
QESVLPGMDA RQTLAWHTWQ GAAGRYPEGI PKKVRKQLHN ELKLISMCGY EMYFLTVHDI
VRFARSQDIL CQGRGSAANS VVCFCLGITA VDPTLQTLLI ARFISRERSE PPDIDVDFEH
ARRETVIQYI YEKYGRDRAA LTAVVSCWRT RGALRDAGKA LGVDAALIDA MARQHHWFSD
AEDQAAEPEP EPDDPALGWV RSKLLRLARL RERLGDDCPQ LSPQRARLWL ELALQLRDSP
RHLSQHVGGF VLTDGPLTRL VPVEPAAMEG RSVIQWDKDD LDTMNLLKVD VLALGMLTVL
RGSLKARAAL RGPRWELADI PKEDAATYDM ICRADTVGTF QIESRAQMSM LPRLRPRVFY
DLVVEVAIVR PGPIQGGMVH PYLQARERRR QGGELVLEKP ALEKALKRTL GVPIFQEQVM
QIAMIAADFS AGDADELRRS MAAWRRKGGV HRFERPLIDG MLANGYSAEF AQAIFRQMLG
FGEYGFPESH AYSFAMLAYA SAWLKRHEPA CFLMALLNAQ PMGFYTPSQL IQDARRHGVR
VLPVDVRHSD WDCTLEAPHE RIAGVELPQP AVRLGLCMVA QLPKTSGERV AQVRAQAPFR
STEDLALRAR LQRAELQALA AADALQGLSG HRRQQMWDAA ALQVQPPLFA GVPVHEAPVQ
LAAAPEGEEI LFDYAATGLS LRRHPLALLR DRLRRHGLRT ALELRDTLAG MRVRACGIVT
VRQRPPTAKG TLFITLEDET GTVNLVVWPD TVTRWGEPLL GARLLAVEGI WQSSSDWGGG
KDCGEPAPAE QASQEVPAVR HLIVHRARDM SRWLGRLGGA GVASRNFH
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