| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4239 |
|---|
| Symbol | |
|---|
| ID | 5749827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 4637771 |
|---|
| End bp | 4638433 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641299342 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001565255 |
|---|
| Protein GI | 160899673 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0202421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.361244 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGTTC TCTTGGTGGA AGACAACGCG CTGGTGGCCA GCGGCGTGCG AGCCGGCCTG
CAGCTGCAGG GCTTTGGCGT GGATACCGTG GCCTCGGCCG GGCAGGCGGA TGCGGCCATC
CGTTCCTCGC ATTTCGATGC CTGTGTGCTG GACCTGGGCC TGCCGGACGA GGATGGTCTC
TCGCTGCTGG CGCGCTGGCG CGGCCAGGGC CTGCAGGTGC CCGTGCTGGT GCTGACGGCG
CGCGATGCCG TGTCACAGCG CATCGAAGGC CTGCAGACCG GCGCCGACGA TTACCTGGTC
AAGCCCTTTG ACCTGCACGA ACTGGCGGCG CGCCTGCATG CGCTGCTGCG CCGCGCGGCC
GGCCGCAGCG TGGACTGGAT CGAGCTGGGC GAGGTGCGCA TCAACCCCGC TGCCGGCCAC
ATCCAGCGCC AGGGCCGCAC GGTGGAGCTG TCGCGCCGCG AGTGGTCGCT GCTGCGCGCG
CTGCTGCAGT CGCCGGGCCG CATCCTGAGC ACCGAGCAAC TGCGCGACAG CCTCTACGGC
TACAGCCAGG ACGTGGAGAG CAATGCCGTC AACGTGCATG TGCACCACCT GCGCCGCAAG
CTGGGCCATG AACTGGTGGA GACGGTGCGC GGCGAGGGCT ATCGCCTGGG CCTGCACCCA
TGA
|
|---|
| Protein sequence | MHVLLVEDNA LVASGVRAGL QLQGFGVDTV ASAGQADAAI RSSHFDACVL DLGLPDEDGL
SLLARWRGQG LQVPVLVLTA RDAVSQRIEG LQTGADDYLV KPFDLHELAA RLHALLRRAA
GRSVDWIELG EVRINPAAGH IQRQGRTVEL SRREWSLLRA LLQSPGRILS TEQLRDSLYG
YSQDVESNAV NVHVHHLRRK LGHELVETVR GEGYRLGLHP
|
|---|
| |