Gene Daci_4233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4233 
Symbol 
ID5749821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4632188 
End bp4632817 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content72% 
IMG OID641299336 
Productnitroreductase 
Protein accessionYP_001565249 
Protein GI160899667 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.064349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.419848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA ACGACAGATC CCTGACTCCC GAGCAGCGCG CCGCGCTGGA CCTGCTGATG 
TCGCGCCAGT CACGCTGGCC GCTGCAGGAG CCGGCGCCCG GCCCCGGCGT GATCGACACC
GTCATCGACG CGGCCTTGCG CGCCCCCGAC CACGGCCAGC TGCGCCCCTG GCGCTTCGTG
CTGGTGCAGG GCGATGCGCG CCATGCGCTG GGCGAGGTGT TCGTGCAGGC CGCCAAGGCG
CGCGATCCCC AGGCCGACGC CGAGCGATTC CGCGCCAAGG CCCTGTCCGC CCCGCTGATC
ATCGCGCTGG GCGTGCACCT GCAGCCCGAG CACAAGGTGC CTGAAAGCGA GCAGCTGCTG
GCCGGTGGCG CTGCCGCCAT GAACATGCTC AACGCCCTGC ACATCCTGGG CTTTGGCGGC
TTCTGGGCCA GCGGTGCCAA CAGCCACGAT GCGCGCGTGC GCGAGGCCCT GGGATTCGAG
CCCCATGACC GGCTCGTCGG CCTGCTGTAT GTGGGCACGC CCGTCTCGTC CGGCCGCGAA
GCACTGCGGC CGCCGCGCAA CCGCTTTGTG CGCGAATGGC AGCCCGGGCA AGACCTGGCC
CTGTCCTCCA GCGCGGCCGA CGAAGGCTGA
 
Protein sequence
MSTNDRSLTP EQRAALDLLM SRQSRWPLQE PAPGPGVIDT VIDAALRAPD HGQLRPWRFV 
LVQGDARHAL GEVFVQAAKA RDPQADAERF RAKALSAPLI IALGVHLQPE HKVPESEQLL
AGGAAAMNML NALHILGFGG FWASGANSHD ARVREALGFE PHDRLVGLLY VGTPVSSGRE
ALRPPRNRFV REWQPGQDLA LSSSAADEG