Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4233 |
Symbol | |
ID | 5749821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4632188 |
End bp | 4632817 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641299336 |
Product | nitroreductase |
Protein accession | YP_001565249 |
Protein GI | 160899667 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.064349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.419848 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA ACGACAGATC CCTGACTCCC GAGCAGCGCG CCGCGCTGGA CCTGCTGATG TCGCGCCAGT CACGCTGGCC GCTGCAGGAG CCGGCGCCCG GCCCCGGCGT GATCGACACC GTCATCGACG CGGCCTTGCG CGCCCCCGAC CACGGCCAGC TGCGCCCCTG GCGCTTCGTG CTGGTGCAGG GCGATGCGCG CCATGCGCTG GGCGAGGTGT TCGTGCAGGC CGCCAAGGCG CGCGATCCCC AGGCCGACGC CGAGCGATTC CGCGCCAAGG CCCTGTCCGC CCCGCTGATC ATCGCGCTGG GCGTGCACCT GCAGCCCGAG CACAAGGTGC CTGAAAGCGA GCAGCTGCTG GCCGGTGGCG CTGCCGCCAT GAACATGCTC AACGCCCTGC ACATCCTGGG CTTTGGCGGC TTCTGGGCCA GCGGTGCCAA CAGCCACGAT GCGCGCGTGC GCGAGGCCCT GGGATTCGAG CCCCATGACC GGCTCGTCGG CCTGCTGTAT GTGGGCACGC CCGTCTCGTC CGGCCGCGAA GCACTGCGGC CGCCGCGCAA CCGCTTTGTG CGCGAATGGC AGCCCGGGCA AGACCTGGCC CTGTCCTCCA GCGCGGCCGA CGAAGGCTGA
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Protein sequence | MSTNDRSLTP EQRAALDLLM SRQSRWPLQE PAPGPGVIDT VIDAALRAPD HGQLRPWRFV LVQGDARHAL GEVFVQAAKA RDPQADAERF RAKALSAPLI IALGVHLQPE HKVPESEQLL AGGAAAMNML NALHILGFGG FWASGANSHD ARVREALGFE PHDRLVGLLY VGTPVSSGRE ALRPPRNRFV REWQPGQDLA LSSSAADEG
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