| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4204 |
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| Symbol | |
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| ID | 5749792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4602520 |
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| End bp | 4605525 |
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| Gene Length | 3006 bp |
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| Protein Length | 1001 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641299307 |
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| Product | type III restriction protein res subunit |
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| Protein accession | YP_001565220 |
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| Protein GI | 160899638 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3587] Restriction endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.416822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0251436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC ACTTCGAGCC CAACCTCGAC TACCAGATGC AGGCCATCGA GGCTGTATGC
GATCTTTTCC GTGGTCAGGA GGTCTGCCGC ACCGAATTCA CGGTGACCAT GAAATTGCCC
GATGACGTGC AGATGTCACT GGGCGTGGCG CAGTCCGACC TTGGCGTTGG CAACCGCTTG
ACCCTGCTGG ACGATGAACT GCTCAAGAAC CTCGCGGACA TCCAGTTGCG CGGTGGCTTG
CCGCCTTCCA GTTCGCTGAC TTCGGGCGAC TTCACTGTGG AAATGGAGAC CGGCACCGGC
AAGACCTATG TGTATCTGCG CTCGATTTTC GAGCTGAACA AACGCTACGG CTTCACCAAG
TTCGTGATCG TGGTGCCTTC AGTGGCGATC AAGGAGGGTG TTTATAAAAC CCTGCAGATC
ACCGAGGAAC ACTTCAAGGG GCTCTACGCG GGCGTACCCT TCGATTACTT CCTATACGAC
TCCGGTAAGC CGGGGCCGGT GCGCAATTTC GCCACGAGCT CCAACATCCA GATCATGGTG
GTGACGGTGG GCGCCATCAA CAAGAAGGAT GTGAACAACC TCTACAAAGA GAGCGAGAAA
ACCGGCGGCG AGAAGCCCAT CGACCTGATC AAGGCCACCC GGCCGATAAT CATCGTGGAT
GAGCCGCAAA GCGTGGACGG CGGCATGGAA GGCCGTGGCA AGGAAGCACT GGACGCCATG
AACCCGCTCT GCACGCTGCG CTACTCCGCT ACCCATGTGG ACAAGCACCA CATGGTATTT
CGCCTCGATG CCGTCGATGC CTACGAGCGC AAACTGGTCA AGCAGATCGA GGTGGCGTCG
GCCACGGTAG AGGACGCGCA CAACAGGCCC TTTGTGCGCC TGGTGAAGGT GGAAAACAAG
CGCGGCCGCA TCAGCGCCAA GGTCGAGCTA GATAAACAGA CCGCCACTGG TGTGCAGCGG
GCTGAAGTGA CGGTCAGCGA CGGCGACGAC CTCCAGCAGA GCGCCGATGG CCGCGCGATC
TATGCCGATT TTCGCGTCGG CGAGATCAAC ACGGCCAAGG GCGAAGCGTT CATGGAGCTG
CGCTACCCCG GTGGCGAGGT GTTTTTGCAA CCTGGCCAAG CCCACGGTGA TGTGGATGCG
CTTGCCGTGC AACGCGAGAT GATCCGCCGC ACGATCAAGG AACACCTGGA CAAGGAGAAG
CACCTGCGCC CGCTGGGCAT CAAGGTGTTG AGCCTGTTCT TCATCGACGC GGTGGACAAA
TATCGTCAGT ACGATGCGGA CGGCCAGCCG GTCAAGGGTG TGTATGCGCA GATGTTCGAG
GAGGAATATC GCCGTGCCGC CAAGTTGCCG GCTTACCAGA GTTTGTTTGC CGAGATCGAC
CTGGAGTCCG CCGCCGAAGA AGTGCACAAC GGTTATTTCT CCATCGACAA GAAAGGCGGC
TGGACTGACA CCGCCGAGAA CAATGCGGGT AACCGGGAGA ATGCCGAACG CGCCTACAAC
CTGATCATGA AGGAGAAGGA GAAGCTGCTG TCCTTCGGTA CGCCGCTGAA GTTCATCTTC
TCCCACTCCG CCCTCAAGGA AGGCTGGGAC AACCCCAACG TGTTCCAGAT TTGCACCTTG
CGCGACATCC AGACCGAGCG CGAGCGCCGC CAGACCATTG GCCGTGGCCT GCGTCTGTGC
GTCAACCAGG ATGGCGAGCG GGTACGCGGC TTTGAGGTCA ACACCCTGAC CGTGGTGGCC
ACGGAAAACT ACGAACAGTT TGCCGAAAAC CTGCAGAAGG AAATCGAGAA AGACACAGGC
ATCCGCTTTG GCATCGTGGA GCAGCACCAA TTTGCCGCCA TTGCCGTGAC TGGCGCTGAT
GGGCACGCCG CACCGCTGGG CATCGAGCAA TCAAAGGCAC TGTGGGAGCA CCTGAAAGCC
GCCGGCCATA TAGATGCCAA AGGCAAGGTG CAGGATTCAC TGAAAACGGC GCTGAAGAAC
GGCACCTTGG AACTGCCGGA CGAGTTTGAT GCGCAAAAGG CCCAGATTGC TGAAGTGCTG
CGCAAGGTGT CGGGCCGGCT CGATATCAAA AATGCCGATG AACGCAGGCA AGTGCCGCTG
CGCAAGGGCA AGGATGGCAA GGCCGTTTAT CTGAGTGACG AGTTCAAGGC ACTGTGGGAC
CGCATCAAGC ACCAAACAAC GTACCGCGTG CAGTTCGATA ACGCCAAGTT GGTGACGGAT
TGCATCGCAG CGTTGCAGAA GGCCCCGGTG ATTGCCAAAG CACGACTGCA ATGGCGCAAG
GCCGACATCT CTATCGGCAA GGCGGGTGTC GCCGCGACGG AGAAAGCGGG CGCGGCGACC
GTGGTGCTGG ACGAGGCGGA TATTGAGCTG CCGGATTTGC TGACCGACCT TCAGGATCGC
ACCCAGCTCA CCCGGCGCAC CATCGTCAGC ATCCTGACGG GAAGCGGTCG CCTGAACGAC
TTCAAACGCA ATCCGCAGCA GTTCATCGAA TTGACTGCCG AAACCATCAA CCGCTGCAAG
CGCTTGGCCC TGGTCGATGG CATCAAGTAC CAGAAGCTGG GTGACCAGCA TGTCTATGCG
CAGGAGCTGT TCGAGAAGGA AGAGCTCACC GGCTATCTCA AGAACATGCT GCTGGATACC
CAGAAGTCGA TCTACGAGCA CGTGGTGTAC GACTCGACCA CTGAGCGGGA TTTCGCCGAT
GGGCTGGAGA AGAACGACGC CATCAAGCTC TACGCCAAGT TGCCAGGCTG GTTCAAAGTG
CCCACGCCGC TGGGCACCTA CAACCCCGAC TGGGCCGTGT TGGTGGAAGA AGACGGCACT
CAGCACCTGT ATTTTGTGGT GGAAACCAAG AGCAGCCTGT TCACCGACGA TATGCGCGAC
AAGGAAAGCG CCAAGATCGA ATGCGGCAAG GCGCATTTCA CTGCGCTGGA GGGCGGCGAG
AACCCAGCCC GGTATGTGGT TGCGCGCTCG GTTGGTGATC TTTTGACCGA GGCGGCAAAG
GGGTAG
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| Protein sequence | MKLHFEPNLD YQMQAIEAVC DLFRGQEVCR TEFTVTMKLP DDVQMSLGVA QSDLGVGNRL
TLLDDELLKN LADIQLRGGL PPSSSLTSGD FTVEMETGTG KTYVYLRSIF ELNKRYGFTK
FVIVVPSVAI KEGVYKTLQI TEEHFKGLYA GVPFDYFLYD SGKPGPVRNF ATSSNIQIMV
VTVGAINKKD VNNLYKESEK TGGEKPIDLI KATRPIIIVD EPQSVDGGME GRGKEALDAM
NPLCTLRYSA THVDKHHMVF RLDAVDAYER KLVKQIEVAS ATVEDAHNRP FVRLVKVENK
RGRISAKVEL DKQTATGVQR AEVTVSDGDD LQQSADGRAI YADFRVGEIN TAKGEAFMEL
RYPGGEVFLQ PGQAHGDVDA LAVQREMIRR TIKEHLDKEK HLRPLGIKVL SLFFIDAVDK
YRQYDADGQP VKGVYAQMFE EEYRRAAKLP AYQSLFAEID LESAAEEVHN GYFSIDKKGG
WTDTAENNAG NRENAERAYN LIMKEKEKLL SFGTPLKFIF SHSALKEGWD NPNVFQICTL
RDIQTERERR QTIGRGLRLC VNQDGERVRG FEVNTLTVVA TENYEQFAEN LQKEIEKDTG
IRFGIVEQHQ FAAIAVTGAD GHAAPLGIEQ SKALWEHLKA AGHIDAKGKV QDSLKTALKN
GTLELPDEFD AQKAQIAEVL RKVSGRLDIK NADERRQVPL RKGKDGKAVY LSDEFKALWD
RIKHQTTYRV QFDNAKLVTD CIAALQKAPV IAKARLQWRK ADISIGKAGV AATEKAGAAT
VVLDEADIEL PDLLTDLQDR TQLTRRTIVS ILTGSGRLND FKRNPQQFIE LTAETINRCK
RLALVDGIKY QKLGDQHVYA QELFEKEELT GYLKNMLLDT QKSIYEHVVY DSTTERDFAD
GLEKNDAIKL YAKLPGWFKV PTPLGTYNPD WAVLVEEDGT QHLYFVVETK SSLFTDDMRD
KESAKIECGK AHFTALEGGE NPARYVVARS VGDLLTEAAK G
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