Gene Daci_4188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4188 
Symbol 
ID5749776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4578340 
End bp4578798 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content60% 
IMG OID641299291 
Producthypothetical protein 
Protein accessionYP_001565204 
Protein GI160899622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.310798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.460517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGC ATGGCTGGTC ACTGCTGTTC CACGACAACC TGATCGAGCA GATGATGAAG 
CTGCGCGCGG CCGTGCTGCG CGCCCAAGAG AACGACCCGG AAGGGTTCGG ATCGAACGCC
AACGTCAAGT TCTTCCGGGC CTTGGTCCAG TTGATGCAAG ACGTGGTGCC GAGTGATCCG
GCGCGCGACG AATACCGCCA GGGCAACACC ATGGGATCGG CCTATCGCCA CTGGCGGCGG
GCCAAGCTCG GAAGGCGATA CCGACTGTTC TTCCGCTACG ACTCGAAGGC CAAAGTCATC
GTGTACGCCT GGGTCAACGA TGAGCAGACT CTGCGGTCTT CGGGAAGCAA ATCAGACCCG
TATGCCGTGT TCGAGAAGAT GCTCGGGCGC GGGAACCCGC CGGACGAATG GAGCGCATTG
GTACAGGCAA GCAAGCAGGA TTGGAGCAAA CTGGAGTAG
 
Protein sequence
MQQHGWSLLF HDNLIEQMMK LRAAVLRAQE NDPEGFGSNA NVKFFRALVQ LMQDVVPSDP 
ARDEYRQGNT MGSAYRHWRR AKLGRRYRLF FRYDSKAKVI VYAWVNDEQT LRSSGSKSDP
YAVFEKMLGR GNPPDEWSAL VQASKQDWSK LE