Gene Daci_4128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4128 
Symbol 
ID5749715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4525421 
End bp4525708 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content70% 
IMG OID641299230 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_001565144 
Protein GI160899562 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.382519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000510411 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGACT ACAAGACCCT GCTGGCCCGC AAGGCCGAAC TCGACGCCCA GATCGCCCAG 
GCCCAGGCCG AGCACAAAGC CGAGGGCATC GCCGCGGCCC GCGCGCTGAT CGCAGAGCAC
GGCCTGACCG CTGCCGATGT CTTCCCCACC GCGAAGGCAA AGGCAGGCAG TGTGGGCGTG
CCGAAGTACC GCAACCCCGC CACCGGAGCC ACCTGGACCG GCCGGGGCAA GCCCCCGAAC
TGGATCAACG GCAAGGACCG CGCGCCGTTC CTGATCTCCG CCGCCTGA
 
Protein sequence
MTDYKTLLAR KAELDAQIAQ AQAEHKAEGI AAARALIAEH GLTAADVFPT AKAKAGSVGV 
PKYRNPATGA TWTGRGKPPN WINGKDRAPF LISAA