| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4100 |
|---|
| Symbol | |
|---|
| ID | 5749687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 4506863 |
|---|
| End bp | 4507495 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641299202 |
|---|
| Product | terminase small subunit |
|---|
| Protein accession | YP_001565116 |
|---|
| Protein GI | 160899534 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3728] Phage terminase, small subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00000000879994 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCAA TTTCCTTGGG TGCCATTGAT AGTTCCTTAT TGAAATTACT TACAGATATT
CCCATGAAGC TAACTCCGAA ACAAGAGCGC TTTGTGGCCG AGTACCTGGT AGACCTGAAT
GCGACTCAGG CCGCGATCAG GTCTGGCTAC AGCGCAAAGA CGGCCCCCGA ACAGGCAAGC
CGACTGTTAA GCAATGTCAA GGTATCAGAA GCGGTCCAGG CAGCCATGCA GGCCCGTTCG
CAGCGCACCG AGATCACGCA GGACATGGTG CTGCGCGAGT TGGCAAAGAT CGGCTTCAGC
GACATCCGCA AGGTGGTGCG CTGGGGTACG ACGGAGCTGC GCACGACCGA AGGCAAGGAC
GGCGAGGCCG TGACGGAGCC CTATCACGGC CTGCGCTTGG TGGCGGCCGA TGAGATCGAT
GACGACACCG CTGCCGCGAT AGCCGAGGTG AGCGAGGGCC GCGACGGGCT TAAGGTCAAG
TTCCACGACA AGAAGGGCGC CCTCGTGGAC ATCGGCCGGC ACTTGGGTAT GTTCAAGGAC
CGCGTGGAGC ACAGCGGACC GGATGGCGGC CCCATCCCAA CGACGCCGAC CGTGATCGAA
CTGGTGGCTC CGAATGTCCA AGGCAAGGAT TGA
|
|---|
| Protein sequence | MRSISLGAID SSLLKLLTDI PMKLTPKQER FVAEYLVDLN ATQAAIRSGY SAKTAPEQAS
RLLSNVKVSE AVQAAMQARS QRTEITQDMV LRELAKIGFS DIRKVVRWGT TELRTTEGKD
GEAVTEPYHG LRLVAADEID DDTAAAIAEV SEGRDGLKVK FHDKKGALVD IGRHLGMFKD
RVEHSGPDGG PIPTTPTVIE LVAPNVQGKD
|
|---|
| |