Gene Daci_4070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4070 
Symbol 
ID5749657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4477705 
End bp4478493 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content65% 
IMG OID641299172 
Productmethyltransferase type 11 
Protein accessionYP_001565086 
Protein GI160899504 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.364701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0929931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAC CCATCGACAT CCTTGCCCAC AACACCGCTG CCTGGAACCT GCAGGCAGCG 
AAAGACTGCG ACTGGTCGCG CCCGGTCGAC AGCGCTGAAA TAGCCCGGGC ACGTGCCGGA
ATCTGGCAGG CGCGGCTCAC GCCCGGCCCC TTGCCAGCGG GCTGGCTGGA TGATGTGCGC
GGCCTGCGCA TCCTCTGCCT TGCCAGTGGA GGCGGCCAGC AAGGACCCAT ACTTGCGGCG
GCAGGTGCGC AGGTCACCGT GTTCGATGCC TCCGCCGGCC AGCTTGCGCA GGACCGGTAT
GTAGCCGAGC GCGAAGGCCT TGCGCTGACC TGCGTGCAGG GCGACATGCG CGATCTGGGC
GTTTTTGCAG ATGCCGGCTT CGATGTGATC TTTCACCCCA TCTCCAACCT CTACGTGCCT
GATGTGCGGC CCGTATGGCG TGAATGCGCG CGGGTGCTCG CGAAGGGTGG GCGCCTTCTG
TCCAGCTTCT GGAATCCGGT GGTCTTCGTG GAGGACCGCG ATCCCGCGTT GCGCGAGCAA
GGGCTCATGC GGCCTGCGTG GCGCCTGCCG TATTCCGATG TGGTGGATTT GCCGCCCGCA
GCGATCGATG CCAAGCGGGA GCGCAATGAG GCGCTGGTGT TCGGCCATAC GCTGGCCGAT
CAGATCGGCG GCCAGCTGGA TGCGGGGCTG GTGCTGACGG GGTTTCATGA AGACTGGCAG
TCCCATGCCC GTTTTGTGAT CGAGAAGTTC GTGCCGACCT TCATTGCGAC ACGTTCTGTG
AAACTCTGA
 
Protein sequence
MTEPIDILAH NTAAWNLQAA KDCDWSRPVD SAEIARARAG IWQARLTPGP LPAGWLDDVR 
GLRILCLASG GGQQGPILAA AGAQVTVFDA SAGQLAQDRY VAEREGLALT CVQGDMRDLG
VFADAGFDVI FHPISNLYVP DVRPVWRECA RVLAKGGRLL SSFWNPVVFV EDRDPALREQ
GLMRPAWRLP YSDVVDLPPA AIDAKRERNE ALVFGHTLAD QIGGQLDAGL VLTGFHEDWQ
SHARFVIEKF VPTFIATRSV KL