Gene Daci_4045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4045 
Symbol 
ID5749632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4452339 
End bp4452746 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content67% 
IMG OID641299147 
ProductDoxX family protein 
Protein accessionYP_001565061 
Protein GI160899479 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0512358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACC GTCTGAGCAA CCCGCTGGCG CTGGCCGGCC GCATCCTGAT CGCGCTGATG 
TTCGTGCCTG CGGGCTTTCA GAAAATCGGA GGCTTCGCCG GGACCGTGGG CTATGCCGCA
TCGGTAGGCA TGCCCATGCC GCAGATCGGC GTGGCCATTG CCCTGGTGGT GGAGATCGTC
GGCGGCCTGG CCTTGCTGCT GGGCTGGTGC ACGCGCTGGG CGGCCCTGGT GCTGGCGTTC
TTCACGCTGG TGGCCAGCTT CTTCTTTCAC ACCTACTGGA GCGTGCCGGC CGACGCGGCC
ATGATGCAGC AGCTGCTGTT CTGGAAGAAC ATCGCCGTGA CTGGCGGCCT GCTGGGCTTT
GCCGCCCACG GTGCCGGTGG CTGGAGCGTG GATGCGCGCC GCCATTGA
 
Protein sequence
MLNRLSNPLA LAGRILIALM FVPAGFQKIG GFAGTVGYAA SVGMPMPQIG VAIALVVEIV 
GGLALLLGWC TRWAALVLAF FTLVASFFFH TYWSVPADAA MMQQLLFWKN IAVTGGLLGF
AAHGAGGWSV DARRH