| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4032 |
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| Symbol | |
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| ID | 5749619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4438714 |
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| End bp | 4439505 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641299134 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001565048 |
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| Protein GI | 160899466 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.104893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.17996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGTCCC CCAAAGTTCT CTTCGGCTTC CACGCCGTCG GCGTGCGCAT GAAGACCGCG
CCCCAATCCA TCATCGAGGT CTACTACGAG GCCACGCGCC GCGATGCGCG CATGCGCCAG
TTCCTCGACC GCGCCAAGTC GGCCGGCGTC CGGCTGATCG AGGCCGACGG CGAACGCCTT
GCCAAGCTGG CTGGCAGCCA TGGCCACCAG GGCGTGGCCG CTCGCGTGGA GGCCGTGGCC
CAGGTGCATT CGCTGGACGA ATTGCTGGAG CAGCTGGAGG CAGACGGCAT CAGCAAGCCG
CTGCTGCTGG TGCTGGACGG CGTGACCGAT CCGCACAACC TGGGGGCCTG CCTGCGCGTG
GCCGATGGCG CCGGCGCCCA TGCGGTGATT GCGCCCAAGG ACCATGCGGT AGGCGTGAAC
GCCACCGTGG CCAAGGTGGC CAGCGGCGCG GCCGAGACCG TGCCCTATTT CATGGTCACC
AACCTGGCGC GCACGCTCAA TGAGCTCAAG GAGCGCGATA TCTGGATCAT CGGCACCAGC
GACGATGCGC CCAAGACCCT GTACGAGGTG GACCTCACGG GCCCCACGGC CCTGGTGCTG
GGCGCCGAAG GCGACGGCAT GCGCCAGCTC ACGCGCAAGA CCTGCGACGA GCTGATCGGC
ATCCCCATGA TGGGCGCCGT CTCCAGCCTC AATGTGTCCG TGGCCAGCGG CGTGTGCCTG
TACGAAGCGC TGCGCCAGCG CGGTCAGGGC ACCACGCCTG CCGTGTCTGC CGCCCCGGCT
GACCAGATCT AG
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| Protein sequence | MSSPKVLFGF HAVGVRMKTA PQSIIEVYYE ATRRDARMRQ FLDRAKSAGV RLIEADGERL
AKLAGSHGHQ GVAARVEAVA QVHSLDELLE QLEADGISKP LLLVLDGVTD PHNLGACLRV
ADGAGAHAVI APKDHAVGVN ATVAKVASGA AETVPYFMVT NLARTLNELK ERDIWIIGTS
DDAPKTLYEV DLTGPTALVL GAEGDGMRQL TRKTCDELIG IPMMGAVSSL NVSVASGVCL
YEALRQRGQG TTPAVSAAPA DQI
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