Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4019 |
Symbol | |
ID | 5749606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4427366 |
End bp | 4429186 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641299121 |
Product | ABC transporter |
Protein accession | YP_001565035 |
Protein GI | 160899453 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0431407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.349748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATGG ATTGGAGCAA GGCACTGCAG GACAGCCTGG CCTGGCTGGC CGTAGCCTCG GCGATCACCG TCGTGGCGTT TGCGGCAGTT GCGGTGCTGT TGGTTCGCTT CACGCGCTGG GGGCGGCAGT TCTGGCAACT GGCCGGACCC TTCCTGCATC CCCGCAACGG CTGGTGGCCG ACACTGGTGT TCGCGCTGCT GCTGGTGCTC TCGCTGATCT CGGTGCGCAT GAACGTGCTG TTCTCCTTTT GGTACAACGG CTTCTACAGC GCGCTGCAGG AGCTGGACCA GAAGGGCTTT TGGCGATTCC TTGGCATCTT CGCGGTGCTG GCCACCATCC ATGTGATGCG CGAGCTGTTC AACTACTACG TGAACCAGGC ATTCCGCATC CGCTGGCGGG TCTGGCTCAA TGAGCGCGTG ACCACCGACT GGATGCGCGG CGACGCCTAC TACCGCAGCC ACTTCCTGGA CGAGCCGGTG GACAACCCCG ACCAGCGCAT CGAGCTGGAT GTGAACACCT TTGTCTCGAA CTCGCTGACC CTGGCGCTGG GTGCCGTCAG CGCCGTGGTC TCGCTGGTGG CGTTCACGGG CATTCTCTGG GGGCTGTCCG CGCCCATTGC CGTGGCGGGC GTGGAGGTTC CGCGGGCCAT GGTCTTTGCG GTCTACGTCT ACGTGATCAT CGCCACGCTG ATCGCCTTTC GCCTGGGCCA GCCGCTGATC CGGCTGAACT TCCTGAACGA GAGGCTCACC GCCAACTTCC GCTACGCCCT GGTGCGCGTG CGCGAATACG CGGAGAACAT CGCCTTCTAC CAGGGCGCGG CCATCGAACG CAACACGCTT TTGACGCGCT TCTCGGCATT GATCGCCAAT GTCTGGGCCC TGGTCTACCG CAGCCTGAAG TTCGACGGCT TCAACCTCAC CGTCAACCAG GTGGCCGTGG TCTTTCCCTT TCTGCTGCAG GCGCCGCGCT TTTTCAGCGG TGCCATCAAG CTCGGTGATG TGATGCAGAC CTCGCAGGCC TTTGGGCAGG TGCAGGATGC GCTGTCCTTC TTCCGAACCT CCTACGACAC CTTCGCCCAG TACCGCGCTG CGCTGGACCG CCTGTGCGGC TTTCTGGATG CCAATGCCCA GACCCGCGAA CTGCCCCAGG TCGTCCACAA AGAGCAACCC GGCGCCCTGG ACATCGAGGG TCTGCAGGTC AGCCGCCCTG ATGGCCACCA TCTGCTCAGC GACCTGCAAC TGAAGCTCAT TCCCGGCCAG GCGCTGCTGA TCAAGGGGCC TTCGGGCAGC GGCAAGACCA CCTTGCTGCG GTCCATTGCC GGCCTGTGGC CGCACGCCGA AGGCACGGTG GGCCGCCCGG GCGGCCACCA GGCGCTGTTC CTGTCCCAGC GTCCGTATCT GCCGCTGGGT GACCTGCGCA CGGCCATTGC CTATCCTGCC GATGCCTCGC CGCAGGACGA TGAGCGACTG CAGCAGGCGC TGCGCCAGGT CAGCCTGGCC CATCTGGCCG ACAAGCTGGA TGTCAACCAG GATTGGTCCC GCATCCTGTC GATTGGCGAG CAGCAGCGCC TGGCCTTTGC CCGCGTGCTG TTCAACCGGC CGGCCATCGT CTTTCTCGAT GAATCCACCT CGGCCATGGA CGAGGGCCTG GAGCATGCGC TGTACACCCT GCTGCGCGAG CAGATGCGCT CGACCATGCT GGTGAGCGTG GGCCACCGCA GCACGCTGGC GGGTTTCCAT ACCCACGCGC TGGCGGTCGA TGGCAATGGC GGCTGGACGC TGTCGGAAGG AAGCGCACCG CAGAGCGCGC CCCAGGCTTG A
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Protein sequence | MDMDWSKALQ DSLAWLAVAS AITVVAFAAV AVLLVRFTRW GRQFWQLAGP FLHPRNGWWP TLVFALLLVL SLISVRMNVL FSFWYNGFYS ALQELDQKGF WRFLGIFAVL ATIHVMRELF NYYVNQAFRI RWRVWLNERV TTDWMRGDAY YRSHFLDEPV DNPDQRIELD VNTFVSNSLT LALGAVSAVV SLVAFTGILW GLSAPIAVAG VEVPRAMVFA VYVYVIIATL IAFRLGQPLI RLNFLNERLT ANFRYALVRV REYAENIAFY QGAAIERNTL LTRFSALIAN VWALVYRSLK FDGFNLTVNQ VAVVFPFLLQ APRFFSGAIK LGDVMQTSQA FGQVQDALSF FRTSYDTFAQ YRAALDRLCG FLDANAQTRE LPQVVHKEQP GALDIEGLQV SRPDGHHLLS DLQLKLIPGQ ALLIKGPSGS GKTTLLRSIA GLWPHAEGTV GRPGGHQALF LSQRPYLPLG DLRTAIAYPA DASPQDDERL QQALRQVSLA HLADKLDVNQ DWSRILSIGE QQRLAFARVL FNRPAIVFLD ESTSAMDEGL EHALYTLLRE QMRSTMLVSV GHRSTLAGFH THALAVDGNG GWTLSEGSAP QSAPQA
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