| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3924 |
|---|
| Symbol | |
|---|
| ID | 5749507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 4323392 |
|---|
| End bp | 4324372 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641299022 |
|---|
| Product | alpha/beta hydrolase domain-containing protein |
|---|
| Protein accession | YP_001564940 |
|---|
| Protein GI | 160899358 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.163224 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0505631 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCTGG ACGCTGACAT TGCGCGCTAT CTCGCCGAGC TGGCGCAGGC AACCCAGGCC
GTGGCCCCGC CCACGCCGCC CACGCTGGCA GCGCTGCGCG AGGCCACCGA CGCCGGGCTG
CGCGCCCTGC ACGGCCCGGC CGAGGCCATG GCCCGCACCG AAGACTTCAC GCTGCCCGCG
CGCGACGGTG CGCCGCTGCG CGTGCGCATC TACCGGCCGC TGGCCTCGGA CACACCCACG
CCCCAGCCCG CCCTGGTCTT CGCCCACGGC GGCGGCTGGT GCCTGGGTTC GCTGGAGGTC
TACGACAACC CCTGCCGCGC ACTGGCCGCG GCAACGGGCG CCGTCGTGGT CTCGGTGGAC
TACCGGCTGG CGCCCGAGCA CCGCTTTCCC GGGCCGCTGC ATGACTTCTG CGATGCCATT
GCCTGGACCT TTGAGCAGGC CGATGCGCTA GGGCTGGACA GCAGGCGCAT CGGCGTGGCC
GGAGACAGCG CGGGTGGCAA CCTCGCGGCC GCTGCCTGCC TGCTGGCGCA GGAAAAGCAA
GGCTGGGGAG CGGCGGACGC ACCGGCCATC GCCCACCAGC TGCTGCTGTA CCCGGCACTG
GACGCGGCCA TGGATTCGCC GTCGTTCCAG CAGTTCGGGG AGGGCCACTA CCTCACGCGT
GCGGCCATGG AGTACTGCTA TGGAGCGTAC CTGGGCGATG CGGCACCGGG GCGGCACGAA
CTTGTCTCTC CGCTGCGCGC CGAACACCTG GCAGGCCTGC CCCAAGCCAC GGTGATCAGC
TGCGAATACG ACCCGCTGCG CGACGAGGCC GAAGCCTATG CGCAGCGGCT GGCGCAGGCC
GGTGTGGCGG TGCAGGCCGT GCGCCTGCCC GGCATGGTGC ACGCCTGCAT GCACATGCTG
GGGATGGCGC CGGCATCACG CCGCCTGTTT GACGAAGCGG GTGCCGCCGT GCGCCAGGCT
TTGGGCACGG CCATCGGCTG A
|
|---|
| Protein sequence | MGLDADIARY LAELAQATQA VAPPTPPTLA ALREATDAGL RALHGPAEAM ARTEDFTLPA
RDGAPLRVRI YRPLASDTPT PQPALVFAHG GGWCLGSLEV YDNPCRALAA ATGAVVVSVD
YRLAPEHRFP GPLHDFCDAI AWTFEQADAL GLDSRRIGVA GDSAGGNLAA AACLLAQEKQ
GWGAADAPAI AHQLLLYPAL DAAMDSPSFQ QFGEGHYLTR AAMEYCYGAY LGDAAPGRHE
LVSPLRAEHL AGLPQATVIS CEYDPLRDEA EAYAQRLAQA GVAVQAVRLP GMVHACMHML
GMAPASRRLF DEAGAAVRQA LGTAIG
|
|---|
| |