Gene Daci_3889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3889 
Symbol 
ID5749472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4283009 
End bp4284109 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content69% 
IMG OID641298987 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001564905 
Protein GI160899323 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.212192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.106591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC ACAGCCTTCA CACCGATCTG TTCTCCCCCA CCCAACTGGG CGGCCTGTCG 
CTCGCCAACC GCTTCGTCAT GGCCCCGCTG ACCCGCAGCC GCGCCGGTGA CGACGGCGTG
CCCACCGAAC TGCACGCCGC CTACTACGCC CAGCGCGCCA GCGCGGGCCT GTTGATCAGC
GAAGCCGTCA ACATCTCCGC ACAGGGCCGG GGCTACAACC TCACGCCCGG CATCTGGACC
GAGCAACAGG TCGCCGGCTG GAAGAAGGTC ACCGACGCCG TGCACGCGGC CGGCGGCAAG
ATCGTGGCCC AGCTGTGGCA CGTGGGCCGC TACTCGCACG TGGACCTGCA GCCCGGTGGC
GTGGCCCCTG TCGCCCCCTC TGCCATCAAG GCCGAAGGCG TCACCTTCAC GCCCAACGGC
GTAGCCGAGG TGTCCATGCC CCGCGCCCTG GAAACCAGCG AAATCCCCGG CATCGTCGAG
CAATACCGCC ACGCGGCCGA ATGCGCCAAG CGTGCAGGCT TTGACGGCGT GGAAGTGCAC
TCGGCCAACG GCTACCTGCT CGACCAGTTC CTGCGCGACT CCACCAACCA CCGCAGCGAC
GCCTATGGCG GCAGCATCGA AAACCGCGCC CGCCTGACGC TGGAAGTCAC CGACACCGTG
GCCAAGGTCT GGGGAGCCGA CCGCGTGGGC ATCCGCCTGT CGCCCGTCAC ACCCAACGCC
GGCAACACGC CGCTGGACAG CGATGTGATG GCCCTCTACG GCTACCTCAT CCCCCAGCTC
AACCGCTTCG GCCTGGCCTA CCTGCACGTC GTGGAAGGCG CCACCGGCGG CTCGCGCGAA
CTGCCGCCCG GCGTGGACCT GGACGCGCTG CGCAAGCTCT TTGACGGCGC CTACATGGGC
AACAACGGCT ATGACCTGGA ACTGGCCATG GACCGCCGCG CCAAGGGCCT GATCGACACC
GTGGCCATCG GCCGCCCCTT CATCGCCAAC CCCGACCTGG TGGCACGCCT GCGCCACGGC
AAGGAACTGG CCGTGGCCCC GCACGAGGCC TACTACGGCG GCGGCGCAAA GGGCTACATC
GACTGGCCTG TGGCAGCCTG A
 
Protein sequence
MTDHSLHTDL FSPTQLGGLS LANRFVMAPL TRSRAGDDGV PTELHAAYYA QRASAGLLIS 
EAVNISAQGR GYNLTPGIWT EQQVAGWKKV TDAVHAAGGK IVAQLWHVGR YSHVDLQPGG
VAPVAPSAIK AEGVTFTPNG VAEVSMPRAL ETSEIPGIVE QYRHAAECAK RAGFDGVEVH
SANGYLLDQF LRDSTNHRSD AYGGSIENRA RLTLEVTDTV AKVWGADRVG IRLSPVTPNA
GNTPLDSDVM ALYGYLIPQL NRFGLAYLHV VEGATGGSRE LPPGVDLDAL RKLFDGAYMG
NNGYDLELAM DRRAKGLIDT VAIGRPFIAN PDLVARLRHG KELAVAPHEA YYGGGAKGYI
DWPVAA