Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3872 |
Symbol | |
ID | 5749455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4268875 |
End bp | 4269345 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641298970 |
Product | hypothetical protein |
Protein accession | YP_001564888 |
Protein GI | 160899306 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000118438 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAATA CCGAAAGATT GCTATCCTTC CTAGGTCATA CTTCGACAAG TGATGATTTT GAGTCATTTC TTCTCGAGAA TGACATAAAA AAGATGCCAA AGGGAGATTC AACAACAAGA ATAAAAACCA AAGACAAATT GATTTCCATG GAATTTGACC CCACAGATTC ATACAAGGAA AAATATCTTT CCCCACCCAT TGGGGACGGC TGGTTCACTT TTGAATCCTT CGACATAAAT AAAGGCTTTG AAAAAGAAAA TCCATTCAAC CTCGCTTTTG CAATGGACAA ATCACAGGTT GAAGAAAAAT TGGGGAAATC AGTCAGCAAG AATCAGGAAG ACCTTGTTCA AGCGTATCAA AAGGACAACC ACATAATTAT CATATTCTAT AAAAACAAGT GGAAAGGCAT AGAAACCATA AGAATAAGAA AGATTAACAA ATTCGACGCA AAGAATCTCA ACCTTAAATA G
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Protein sequence | MMNTERLLSF LGHTSTSDDF ESFLLENDIK KMPKGDSTTR IKTKDKLISM EFDPTDSYKE KYLSPPIGDG WFTFESFDIN KGFEKENPFN LAFAMDKSQV EEKLGKSVSK NQEDLVQAYQ KDNHIIIIFY KNKWKGIETI RIRKINKFDA KNLNLK
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