| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3858 |
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| Symbol | |
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| ID | 5749441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4250923 |
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| End bp | 4251477 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298956 |
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| Product | type VI secretion system lysozyme-related protein |
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| Protein accession | YP_001564874 |
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| Protein GI | 160899292 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.229758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCCA GTCCCCTCAA CCCCATGCCC ACGCTGCGCA CGCGCCAGAA CCAGGCGACC
GCAGCCAAGG ACCGGCTGCA GCCCGCCCTG CTGGACCGGC TGACCGACCA TGAGCCCCAT
CTGCGCACCG AGCGGCCCGA CGCGGTCTTC GTGAACGAAT CCCGCCTGCG CGAGGCCCTG
CTGCGCGACC TGGGCTGGCT GCTCAATGCG CGCGATGCCT GGGACCACGT GGAGATGGAG
GGGCTGGAGC ATGTGCAGCG CTCGGTCATC AACTACGGCA TGCCGCCGCT GGCCGGCCAG
CTGCTGTCCG AGCTGGACTG GAGCCATGTG GAGCGCAGCA TCCGCGAAAG CATCCTGGCC
TTCGAGCCGC GCATCCTGCC CAAGACGCTG GCCGTGACGC TGCTGGCCTC CACCGAGCAG
CTCAACCACC ACAACACGCT GCAGTTCGAG ATCCGCTGCC AGTTCTGGTC CATGCCCTAT
CCGCTGGAGC TGCTGCTCAA GACCAGCCTG GACCTGGAGA CCGGCCAGGT CTCGCTGCAA
AACCTCAGGG CCTGA
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| Protein sequence | MRPSPLNPMP TLRTRQNQAT AAKDRLQPAL LDRLTDHEPH LRTERPDAVF VNESRLREAL
LRDLGWLLNA RDAWDHVEME GLEHVQRSVI NYGMPPLAGQ LLSELDWSHV ERSIRESILA
FEPRILPKTL AVTLLASTEQ LNHHNTLQFE IRCQFWSMPY PLELLLKTSL DLETGQVSLQ
NLRA
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