| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3851 |
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| Symbol | |
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| ID | 5749434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4245601 |
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| End bp | 4247094 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641298949 |
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| Product | EvpB family type VI secretion protein |
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| Protein accession | YP_001564867 |
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| Protein GI | 160899285 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.538189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCG CAACCCAACT CGAACAATCG ACCCAGGCGC TGGCCGGCAG CGAATTCGGC
AGCCTGCTGC AAAAGGAATT CAAGCCCAAG ACCGACCAGG CCCGCGAAGC CGTGGAAGCG
GCCGTGCAGA CGCTGGCCCA GCAGGCCCTG GGCTCGGCGA TCACGCTGTC CAACGATGCC
TACCAGACGG TGCAGGCCAT CATTGCCGAG ATCGACCGCA AGCTGTCCGA GCAGATCAAC
CGCATCATCC ACCACGACGA CTACCAGAAG CTCGAAGGCG CCTGGCGCGG CCTGCACCAC
CTGGTGACCA ACACCGAGGT GGACGAGATG CTCAAGATCC GCGTCATGAA CATCTCCAAG
AAGGAGCTGC ACCGCAACAT GCGCCGCTTC AAGGGCGTGG GCTGGGACCA GAGCCCCGTC
TTCAAGAAGG TGTACGAAGA GGAGTACGGC CAGTTCGGCG GCGAGCCCTT CGGCTGCCTG
GTGGGCGACT ACCACTTCGA CCACAGCCCG CCGGACGTGG AGCTGCTCGG TGAAATGGCC
AAGGTGGCCG CCGCGGCCCA CTGCCCCTTC ATCTCGGGCG CGGCGCCTGC CATCATGCAG
ATGGAATCCT GGCAGGAGCT GGCCAACCCG CGCGACCTGA CCAAGATCTT CACCAACACC
GAGTACGCCG CCTGGCGCAG CCTGCGCGAG TCCGACGACG CCAAGTACAT CGGCCTGGCC
ATGCCCCGCT TCCTGGCACG CCTGCCCTAC GGCGCGCGCA CCAACCCAGT CGATGAATTC
GACTTCGAGG AAGAAACCGA CAGCGGCGAC CACGGCAAGT ACTGCTGGGC CAACTCGGCC
TACGCCATGG CGGTCAACAT CAACCGCTCG TTCAAGTACT ACGGCTGGTG CACCTCCATC
CGCGGCGTGG AATCGGGCGG CGCGGTGGAC AACCTGCCGG CGCACACCTT CCCCACCGAC
GATGGCGGCG TGGACATGAA GTGCCCCACG GAAATCGCCA TCAGCGACCG CCGCGAGGCC
GAGCTCGCCA AGAACGGCTT CATGCCCCTG GTGCACCGCA AGAACTCGGA CGTGGCCGCC
TTCATCGGCG CCCAGTCGCT GGCCAAGCCC GCCGAGTACT ACGACTCCGA CGCCACGGCC
AATGCCAACC TGTCGGCGCG CCTGCCCTAC ATGTTCGCCT GCTGCCGCTT CGCGCACTAC
CTCAAGTGCA TCGTGCGCGA CAAGATCGGC TCCTTCCGCG AGCGCACCGA CATGGAGCGC
TGGCTCAACG ACTGGATCAT GAACTACGTG GACGGCGACC CGGCCAACTC CTCGCAGGAG
ACCAAGGCCC GCAAGCCCCT GGCCGCCGCC GAGGTGCAGG TGCAGGAAGT CGAGGGCAAC
CCCGGCTACT ACACCTCCAA GTTCTTCCTG CGCCCCCACT ACCAGCTGGA AGGCCTGACC
GTGTCGCTGC GCCTGGTGTC CAAGCTGCCT TCGGTCAAGC AGGGCGCGAA GTAA
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| Protein sequence | MNTATQLEQS TQALAGSEFG SLLQKEFKPK TDQAREAVEA AVQTLAQQAL GSAITLSNDA
YQTVQAIIAE IDRKLSEQIN RIIHHDDYQK LEGAWRGLHH LVTNTEVDEM LKIRVMNISK
KELHRNMRRF KGVGWDQSPV FKKVYEEEYG QFGGEPFGCL VGDYHFDHSP PDVELLGEMA
KVAAAAHCPF ISGAAPAIMQ MESWQELANP RDLTKIFTNT EYAAWRSLRE SDDAKYIGLA
MPRFLARLPY GARTNPVDEF DFEEETDSGD HGKYCWANSA YAMAVNINRS FKYYGWCTSI
RGVESGGAVD NLPAHTFPTD DGGVDMKCPT EIAISDRREA ELAKNGFMPL VHRKNSDVAA
FIGAQSLAKP AEYYDSDATA NANLSARLPY MFACCRFAHY LKCIVRDKIG SFRERTDMER
WLNDWIMNYV DGDPANSSQE TKARKPLAAA EVQVQEVEGN PGYYTSKFFL RPHYQLEGLT
VSLRLVSKLP SVKQGAK
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