Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3847 |
Symbol | |
ID | 5749430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4242688 |
End bp | 4243392 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641298945 |
Product | hypothetical protein |
Protein accession | YP_001564863 |
Protein GI | 160899281 |
COG category | [S] Function unknown |
COG ID | [COG3913] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03373] type VI secretion-associated protein, BMA_A0400 family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00197682 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGAC CGGCTGTGAA CGCCATGACC CTCCAGCGAC CCTGCGCCGC CTGGTGGGGC AAGCTGCCAA GCCAGGGCGA TTTCGTCGGC CGGCGCATGC CCCACGCACT GACCATGCGC TGGGACGAGT GGCTGCGCAA CGGCATGGAC CAGCTGCGCA GCGATGCGGC CGACAACTGG TCCACGCGCT TCGTGCACTC GCCCCTGTGG TTCTTCCTGT GCCCCGCCTC CATCCTGGGC CAGCCCATGG TGGGCGTGAT CGGGCCCAGC TCCGACCGCA TCGGCCGGCT CTTTCCACTG GCCATCATGG CCACGGTGGA CGGCAGCTCC GGCATGCCGG CGTCCGACCA GGACATCGAA CGCTTTCTGA GCGGCGCCCG TGATGCGCTC ATCGACGCGC GGCGCCTGCC CCTGTCGGCC CAGCAGCTCG ACGAGCGGCT GGCCACCCTG CAATGGCCGT TCCAGCAGGA CGGCCGCACG CCGGGCAGCG CCTCCATCCA CAGCCTGCTG GCGGACCTTG ACATGGGCGC CTCGCAGGGC AACGCCGCGC GCCTGCCACG CATGGACTGG CGCGCCTGCA TGCGCCCGGG CTCCACCACC TCCGTCTGGT GGATCTCGGC CACGCCGCGC CACGCCCCTG ACGAAGTGGT CCAGCACGAA GTGCTGCACC GCCGCCTGTT CACCCGGCTG TTCAAGGGCG CCTGA
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Protein sequence | MSGPAVNAMT LQRPCAAWWG KLPSQGDFVG RRMPHALTMR WDEWLRNGMD QLRSDAADNW STRFVHSPLW FFLCPASILG QPMVGVIGPS SDRIGRLFPL AIMATVDGSS GMPASDQDIE RFLSGARDAL IDARRLPLSA QQLDERLATL QWPFQQDGRT PGSASIHSLL ADLDMGASQG NAARLPRMDW RACMRPGSTT SVWWISATPR HAPDEVVQHE VLHRRLFTRL FKGA
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