Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3837 |
Symbol | |
ID | 5749420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4228393 |
End bp | 4228875 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641298935 |
Product | hypothetical protein |
Protein accession | YP_001564853 |
Protein GI | 160899271 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0274684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.040602 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTTG ATATGTTCAT GAAGGTCGAG GGCGCCAGTG GCGAGTCCCA GGATTCCAAC CACAAGGGCT GGACCGACAT CGACTCCTTC ACCTGGGGTG CTACCCAGCC CAACACCATG TCCAGCGGCG GTGGTGCCGG CGCCGGCAAG GTGAGCTTCC ATGACCTGAA CGTCATCGCC AAGGTGGACA AGTGCTACCC CGCCGTGCTC AAGCACTGCG CCACGGGCAA GCACCTGGGC CAGGTCGACA TCTCGCTGTG CAAGGCCGGC GGCACGCAGA TCGAGTTCAC CAAGATCACC CTGACCGACG TCATGGTGAC GAACGTGACC GTCAGCGGCG CCAACTCCTC TGACACCGTG ACCGTGAACT ACTCGTTCCA GGCTGCCAAG GTCAAGACCC AGTACTGGGA GCAGACCAAC CAGGGCGGCA AGGGCGCCGA GAGCCAGATG GGCTTCAACA TCAAGGAAAA CCGCGAAGCC TGA
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Protein sequence | MSVDMFMKVE GASGESQDSN HKGWTDIDSF TWGATQPNTM SSGGGAGAGK VSFHDLNVIA KVDKCYPAVL KHCATGKHLG QVDISLCKAG GTQIEFTKIT LTDVMVTNVT VSGANSSDTV TVNYSFQAAK VKTQYWEQTN QGGKGAESQM GFNIKENREA
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