Gene Daci_3801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3801 
Symbol 
ID5749384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4183404 
End bp4184411 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content58% 
IMG OID641298900 
Producthypothetical protein 
Protein accessionYP_001564818 
Protein GI160899236 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.694709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.119002 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAA ACCTGCCCTC CTGCCTGTTC AACCCTATTG ATCGCCGCAA GCTGCTTGGA 
CTGGCGGGTG CGGTCGGTCT GTCCCATATT GCCACCCCTG CCCTCGCCCA GAAATGGCCG
AATAAATCAA TACGATTTGT TGTGCCGTTT GCCCCTGGCG GCAGCTCTGA AATAGTTGCA
CGCTCCACGG CAGCCGAGAT GACGAAGACG ATCGGCCAGA GTGTCTACGT GGACAACAAG
CCTGGCGCAG CGGGCAATAT TGCGATGTCT GAAGTCGCCC GTGCCGAGGA TCACCACACC
GTCATTCTCG GCCATATCGG CACCCTGGCC GTGAATCCTT ATATTTTCGC CAAGCTCCCC
TACAACGTGG AAAAGGACTT CAAGCCAATC AGTTTGCTGG CCAAAGTACC GAGTCTTTAT
GTCGTGAATC CCAAGGTTCC GGTGAAAAAC ATCAAGGAAC TGATTGAATA TGCCAAGGCC
AATCCGGAAA GCCTAAGCTA CGGCTCTGCC GGCAATGGAA GTGCGGGTCA TCTGGCGTTT
GAATACCTGA AGCTGACTTC CGGGTTCTCC ATGCTGCACG TCCCGTATCG GGGTACCGGC
CCGATGATGA CGGACCTGCT GTCCGGCCGC GTGGGCGCTT CGGCGATCGG GGCTGCGGCC
GTGATCCCGT TCATCAAGTC CGGCAAGCTG CGTTGCATCG CCACGGGTTC AAGCAAGCGC
ATTCCCCAAC TGCCCGACGT GCCGACCGTC GCGGAACAGG GTTTCCCCGG CTTCGAGATG
ACGCAGTGGT ATGGCAAGCT CGCCCCGGCC AATTTTTCCT CCAGTGAGAT AGACCTGCTG
GCTGCCGAAA CCAGCAAGGC AGTTCGGGCT CCGTCCTCGG TCGAACGTCT GCATGCAGAC
GCCGCCGAAA TCATTGGCGA TACCCCGGCA CAGTTTGCCG AATTCATCGC CCGCGAGCAG
GCGCGCTGGA AGCAAGTCAT TGCCAAGGCG CAGATCAAAG CCGACTGA
 
Protein sequence
MQENLPSCLF NPIDRRKLLG LAGAVGLSHI ATPALAQKWP NKSIRFVVPF APGGSSEIVA 
RSTAAEMTKT IGQSVYVDNK PGAAGNIAMS EVARAEDHHT VILGHIGTLA VNPYIFAKLP
YNVEKDFKPI SLLAKVPSLY VVNPKVPVKN IKELIEYAKA NPESLSYGSA GNGSAGHLAF
EYLKLTSGFS MLHVPYRGTG PMMTDLLSGR VGASAIGAAA VIPFIKSGKL RCIATGSSKR
IPQLPDVPTV AEQGFPGFEM TQWYGKLAPA NFSSSEIDLL AAETSKAVRA PSSVERLHAD
AAEIIGDTPA QFAEFIAREQ ARWKQVIAKA QIKAD