Gene Daci_3785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3785 
Symbol 
ID5749368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4163254 
End bp4164342 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content65% 
IMG OID641298884 
Producthypothetical protein 
Protein accessionYP_001564802 
Protein GI160899220 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0141562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.251227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGAT ACAAATATCT AAATATCTAT GCATTTTCCC CATGGCAGCC GGAACCTGTT 
CCTTCGCCAT GCCTGCTCTC CAACCTGATG AAGACCATGC CCCTCCAAAC GCTCCGCACT
CCCCTGGCCA CGGCCCTGCT GTCCGCCCTG GCCCTTGTTG CATCCGCTCA AGCCTCTGCC
CAGGGGGCCG GCGCCTGGCC CAGCAAGCCC ATTCGCATCG TCGTCCCCTT TCAGGCCGGG
TCCGCCACGG ATCTTTTGAG CCGGCAAGTG GGGGCCGGGC TGAGCACTTC ATTGGGGCAG
CCCGTGCTGG TGGAAAACAA GCCGGGTGCC GCCGCCATGA TCGGCAGCGA CACCGCGGCC
CGGGCCCCGG GCGACGGCTA CACCCTGCTG ATGAGCGGGC CGGCCTCCAT GGTCACCAAC
CGTTTTCTCT ACAAGAAGCT GAGCTACAAC CCGGACGCCT TCGAGAAGGT GGCCATCGTG
GCGGTCACGC CCAATGTGCT GCTGGCGAAC CCGTCCCTGC CGTTCAGTAC GCTGGCTGAG
ATGGTGGCCT ATGCCAAGGC AAACCCCGGC AAGCTGACCT ATGCCTCATT CGGGGCCGGC
ACGACCTCGC ACATGGCTGG CGAGTTCCTG CGCCAGGCCG CCGGCATCGA CATAGTGCAT
GTGCCCTACA AGGGTGCGGC CGAGGCCATC CCGGCCTTGA TATCGGGCCA GGTCTCCCTG
TACTTCGACA CCATCATGAC CGCCTTGCCC CAGGTGAAGG CCGGCAAGCT GCGCGCCCTG
GGCGTATCGA CCGCAAGCCG CGCCGCCATG GCCCCGGACA TCCCGACGAT TGCCGAACAA
GGCTATCCGG GCTTTGACAT CGCCCCGTGG TACGGCATCG TGGCCAGCCA CGGCACGCCG
CCGGCCGTGG TCTCCCGGCT CAACACCGAG ATCAACAAGC TGCTGAACAC CCCTGAGTTC
CGCGAGCGCC TGGTGGCCAC CGGCGCCGAA GCCCGTGGCG GCAGCGTTGC CGACTTCGAG
GCCTTCGTCA AAACCGAGGT CCCCCGCACG GAGAAGCTGG TGCGGCAGGC CGCAATCGCG
CTGCAGTAA
 
Protein sequence
MIGYKYLNIY AFSPWQPEPV PSPCLLSNLM KTMPLQTLRT PLATALLSAL ALVASAQASA 
QGAGAWPSKP IRIVVPFQAG SATDLLSRQV GAGLSTSLGQ PVLVENKPGA AAMIGSDTAA
RAPGDGYTLL MSGPASMVTN RFLYKKLSYN PDAFEKVAIV AVTPNVLLAN PSLPFSTLAE
MVAYAKANPG KLTYASFGAG TTSHMAGEFL RQAAGIDIVH VPYKGAAEAI PALISGQVSL
YFDTIMTALP QVKAGKLRAL GVSTASRAAM APDIPTIAEQ GYPGFDIAPW YGIVASHGTP
PAVVSRLNTE INKLLNTPEF RERLVATGAE ARGGSVADFE AFVKTEVPRT EKLVRQAAIA
LQ