Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3773 |
Symbol | |
ID | 5749356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4148115 |
End bp | 4149542 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641298872 |
Product | TonB family protein |
Protein accession | YP_001564790 |
Protein GI | 160899208 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.854647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.705204 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCTTC CCTTTCTTGC TCGGCTGGGT CTGGATCTCA ACGCTGACGA GCGCGCGATT CGTCGTGCCT ATGCCCGCGC ACTCAAGGAA ATTGACCAGG AAACAGACCT TGACGGTTTT CAGGCACTGC GGGAGTCCTA TCAGGCCGCG CTTGCCTGGC ATGCCCAGCG CCGTCCTGAA ACGGCAATCC CACCCTCAAG TTCAGACAGC AAGGAAGACG CACCGCACTC GCGAAACTCG TCCGACGCGC ATATCGATAC GGGGAATACG CCTTCCCGCA AGGCAGACCC TGCATATTCC GCCCGCACCA TCGACCATGC CCGGCAGATA GCGCACGCAC TGCTGGCAGA CCTGCGCAAA AAGCTGGCAG CCGGGTGGCC CCAAGACCGT ACTGCTGTCA GCATCTGGCT GAACGAGGTT CTGAAGGACC AGCGCCTGAT CGACATGGAT GCGCGCCACT TCTTTGAATG GGGCATGGCA GCCCTCCTGG CTGAGGGCTG GCAACCCCGC AAGGAGTTCC TGTTCGGCCC TGCGATAGAT TGCTTTGGCT GGAAGCAAGA CCGTGGCCGC CTTGCAGCAT TTGGCCACGC CGGGGCCGTC GTGGCATCCG CCATTGGCGA ACTGGAGTTC TTCGACACCA GGCCAAAGCA CGTACGGGTA GCGCAAAAGG AATTGATCCA GGGTCTGCGC GAAAGCAGCA AGCCGCCGAC ATCGACCCTC TTGAAGCACA GGGCCACGTT GCGGGATGTC GTCCAACACT ACCCTCACTG GCTGCACGTC ATCACCGACA CACGCAATGC GAAGCGCTGG CTTGAGTGGG CAGATCAGAT ACCGCGATGG CGTCAACGAC TGGCTCCCAG CGCCTCGTCC AGTACGAGCG AGAGAAAAGG TGGAAATTTC TGGTTTGGCT GGATTTTTCT TCTCGTGCTT GTCCTGTCAA CACTGGGGAA GATCTCCGCG CTCGTGAACT CATCTGGGCC ATCCGTGCCG AGGCACAGCC CTCCCTTGAC CACTCAGTCG TTCGCACCGC CTGCGGCTGC AACTGACGGC ACTGCCTCCA GCTTTACCAG AATCGTCAAG GACTTGCCTG CCTCAAGCGC GGCGCCTGTC CCCCTTCCCC TGGACGATGA CTCCCTCAAA CTGCCGCCTG CGGCCGAGCT TCCTCGGCAT CTGCAGGCTC CGCGCCTGGC TTATCCGGAG CAGGCCAAGC GCCTGCGACA AGAGGGCAGG GTCGTGATCA AGGCGCGAAT TGATCCTGAC GGCAAGATTC GTCGTGCAGA AATAGACCAA AGCTCAAGCC ACGCCATCCT GGACGAAGCA GCGATGGCCG CCGTGTTGAA GGCTTCCTTC ATTGCGGCGA AAGACAGCTC AGGCGCATCG GTCCCCAGCG TCATCAAGAT TCCTATCAAA TTTGAGCTCG GCAACTAG
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Protein sequence | MPLPFLARLG LDLNADERAI RRAYARALKE IDQETDLDGF QALRESYQAA LAWHAQRRPE TAIPPSSSDS KEDAPHSRNS SDAHIDTGNT PSRKADPAYS ARTIDHARQI AHALLADLRK KLAAGWPQDR TAVSIWLNEV LKDQRLIDMD ARHFFEWGMA ALLAEGWQPR KEFLFGPAID CFGWKQDRGR LAAFGHAGAV VASAIGELEF FDTRPKHVRV AQKELIQGLR ESSKPPTSTL LKHRATLRDV VQHYPHWLHV ITDTRNAKRW LEWADQIPRW RQRLAPSASS STSERKGGNF WFGWIFLLVL VLSTLGKISA LVNSSGPSVP RHSPPLTTQS FAPPAAATDG TASSFTRIVK DLPASSAAPV PLPLDDDSLK LPPAAELPRH LQAPRLAYPE QAKRLRQEGR VVIKARIDPD GKIRRAEIDQ SSSHAILDEA AMAAVLKASF IAAKDSSGAS VPSVIKIPIK FELGN
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