| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3764 |
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| Symbol | |
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| ID | 5749347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4135814 |
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| End bp | 4136833 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641298863 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_001564781 |
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| Protein GI | 160899199 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.289423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.209559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATTC CCTTTGCACT CGCCGGCCTG ATGGCCGCCG TCACCACGCT GGCCGCCACG
GGCCAGGCCA TGGCCCAGGA CTTCAAGCCG CGCATCGTGC GCTTCGGCTA TGGCCTGGTC
GATGAGTCCA ACCAGGGCCG CGCGGCGCGC TTCTTTGCCA AGGAGGTTGA GAAGGCCACG
GGCGGCAAGA TGAAGGTGCG TGCCATCGGC AATGCCTCGC TGGGCTCGGA CACGCAGATG
CAGCAGGCGC TGATCGGCGG CGCCCAGGAG ATGATGGTCG GCTCCACCGC CACCCTGGTG
GGCCTGTCGC CCGAGATGGC CGTCTGGGAC ACCCCCTTCC TGTTCAGCAA TGTCAAGGAA
GCCGACGCCG TGCTGGACGG CCCCGTGGGC GAGAAGGTCA AGGCCACGCT GGAGCCCAAG
GGCATGGTGG GCCTGGTCTA TTGGGAAAAC GGTTTCCGCA ACCTCACCAA CAACAAGCGC
CCCATCGCCA AGATGGAAGA CCTGGCCGAC GTGAAGCTGC GCGTGATGCA GAACAACGTC
TTCCTGGACA GTTTCAAGGC CCTGGGCGCC AATGCCGTTC CGCTGCCGTT CTCCGAGCTG
TTCACGGCGC TGGAGACCCG TGCCGTCGAT GGCCAGGAAA ACCCCTTCAA CACCGTGCTG
TCCAGCAAGT TCTATGAAGT GCAGAAGTAC CTCACGGTAT CCAACCACGT CTACAGCCCC
TGGATCGTCA CCGTCAGCAA GAAGTGGTGG GACACGCTGA GCCCGGCCGA GAAGAAGGTG
CTGCAGGATG CCGCCGTCAA GAGCCGCGAG TTCGAACGCA AGGATACGCG CGAGGAAGCC
GCCAAGGCCC TGGCCGACAT CAAGGCCAAG GGCATGCAGG TCAACGAGCT GCCCGCCGCA
GAAGCCAGCC GCATGCGCGA CAAGCTCGCG GCGGTGAATG CCGGCATTGC CAAGACCGTG
GGCCAGGGCA CGTGGGACGA GGTGCAGGCC GCCGTCAAGC AGGCGCGCGC AGTGAAGTAA
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| Protein sequence | MRIPFALAGL MAAVTTLAAT GQAMAQDFKP RIVRFGYGLV DESNQGRAAR FFAKEVEKAT
GGKMKVRAIG NASLGSDTQM QQALIGGAQE MMVGSTATLV GLSPEMAVWD TPFLFSNVKE
ADAVLDGPVG EKVKATLEPK GMVGLVYWEN GFRNLTNNKR PIAKMEDLAD VKLRVMQNNV
FLDSFKALGA NAVPLPFSEL FTALETRAVD GQENPFNTVL SSKFYEVQKY LTVSNHVYSP
WIVTVSKKWW DTLSPAEKKV LQDAAVKSRE FERKDTREEA AKALADIKAK GMQVNELPAA
EASRMRDKLA AVNAGIAKTV GQGTWDEVQA AVKQARAVK
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