Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3711 |
Symbol | |
ID | 5749294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4077325 |
End bp | 4078839 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641298810 |
Product | transcriptional regulator |
Protein accession | YP_001564728 |
Protein GI | 160899146 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0129081 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGA CCTTCGAGCT TGAGACCCTG AAGATCCGCA TGGGAGATAC CGACCTGCGC CAGCTGGACC TTCACCAGCG GGTGCAGCGC GCCATGCGTG CGCTGATCCT GGATGGGGCG CTGCTGCCGG GCCTGAAACT GCCGGCCACG CGCTCGCTGG CCGACTCGCT GGGCATTGCC CGCGACACGG TGGAGAACGC CTACACCCAG CTGCACCGCG ACGGCTTCAT CGTGCGGCGC CAGGGATCGG GCAGCTATGT CTCCGAGACC ATCGGCACCG AGCTGCGGGG CCGGGCGGCG CGGCGCGGCC GCTCGCCCGA GCACGAGCGC AGCGCCCAGG TGGCCGCAGC GGGCAGGGCC GGTGCCGGCC TGAGCCGGCG CGGCCAGGCC ATTGTTGACG GCGGAGGCAT CGCCGACCAG CAGACCATTC GGGCCTTTGC CACCGGCCTG CCCGAGACGC GCACCTTTCC CACCGATGTC TGGGAGCGGC TGCAGCGGCA GGCGCTCAAG GACTACCGCG CCAGCGTCCT GCTGCACGGC GACCCGCAGG GCGCCGAGCC GCTGCGCAAG GCCATAGCCA CCTACCTCAA CCTGGAGCGT GGCGCCAAGG TGGACGCCGG GCAGATCGTG GTGCTCAGCA GCACGCGGCA GGCGCTGTTC CTGTGCGCCC AGCTGCTGGT GGATGCGGGC CGGCCCATCC TGCTGGAGAA CCCGGGCTAC TTCGGCGCCC GCAAGGCCTT CGAGTCGGCC GAGGCCAAGG TCCTGCCCAT CGACGTGGAC GCGCAAGGCA TACGCACGGA CCTGCTGCAC GCCGACCGCA GCGGCGCCAC CTGCGTCTAT GTCACGCCGT CGCACCAGTA CCCCACGGGC GTCACCATGC AGCTGGAGCG GCGGCTGGAC CTGATCCGCT GGGCCTTCGA GAGCGGGCGC TGGATTATCG AGGACGACTA CGACAGCGAA TTCCACTACG ACGGCATGCC CACCGCCTGC GTGCAAGGCC TGGACAAGCA CGCGCGCACC ATCTACATCG GCACCTTCGG CAAGACCCTG TACCCGGGCC TGCGCATGGG CTACATGGCT TTGCCGCAGG AGCTGGTGCG CGCCTTTGTC CAGGCGCGCA GCATCATGGA CGGGCACACG CCCCAGATCC AGCAGCTGAC GCTGGCGCGC TTCATGGAAG ACGGCCACTA CAACTCCCAC GTGCGGGCCA TGCGCAAGCT GTACGCGGGG CGGCGCGAGG TCATCCTCGA ATCCATAGGC AGGCACTTGG CCGGCATCGT CACCGCGCCA CGGCCCCAGG GCGGCATGCA GGTGCCCTGC CTGCTGGAGC CCGGCTGGTC CGAGGAAGAC ACCATCCGCC GCGCCGCCGC GGCCGGCGTG CTGCTGCAGG GGCTCAGCCG CCTGTACGCG GGCGAGCAGC GGCAGCCGGG CTGGCTGCTG GGCTATGCCT CGCTCACGGC CTACGAGATC GAGGCCGCCG TGCTGCGCCT GGCCAACGCG CTGCGAAAAC CCTGA
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Protein sequence | MSKTFELETL KIRMGDTDLR QLDLHQRVQR AMRALILDGA LLPGLKLPAT RSLADSLGIA RDTVENAYTQ LHRDGFIVRR QGSGSYVSET IGTELRGRAA RRGRSPEHER SAQVAAAGRA GAGLSRRGQA IVDGGGIADQ QTIRAFATGL PETRTFPTDV WERLQRQALK DYRASVLLHG DPQGAEPLRK AIATYLNLER GAKVDAGQIV VLSSTRQALF LCAQLLVDAG RPILLENPGY FGARKAFESA EAKVLPIDVD AQGIRTDLLH ADRSGATCVY VTPSHQYPTG VTMQLERRLD LIRWAFESGR WIIEDDYDSE FHYDGMPTAC VQGLDKHART IYIGTFGKTL YPGLRMGYMA LPQELVRAFV QARSIMDGHT PQIQQLTLAR FMEDGHYNSH VRAMRKLYAG RREVILESIG RHLAGIVTAP RPQGGMQVPC LLEPGWSEED TIRRAAAAGV LLQGLSRLYA GEQRQPGWLL GYASLTAYEI EAAVLRLANA LRKP
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