| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3668 |
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| Symbol | |
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| ID | 5749251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4028509 |
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| End bp | 4030038 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641298767 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001564685 |
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| Protein GI | 160899103 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.22591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0459269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGA CACTTGATCC CGCAGCCACG CTGAAGGAAG CGCAGGCACA GCAGACACCG
CAGACATCGA GTGCATCCTC CGCTACGGCT TTCCAGGCCG CTGCGCCCTG GCGTCCGCTG
CGCTCCTCCG ATCTCTCGCT GGTCGAGCAG CTCGTGGACC ACTACGGCGG CCTCATCCGC
CACCATGGCC TGCGCGCGGG CTCGCGGCTG CCCTCGGTGC GCGCGCTGGC GCAGCAGGCC
GGCGTCAGCC GCGATACCGT GGTCCAGGCC TACGACCGGC TGGCCGCGCA AGGCCTTGTG
CATTCGCGGC GCGGCTCCGG CGTCTTCGTC AGCGCCCGGC GCGCGGCCCA GGCCGTGCCG
CGCGCCAGCC ACGGCCTGCC CACGCTGGAG CAGGGCGCGG CCTTTGATAC CGCCTTTCTG
TTGCGCAGCA TGTTCCGCGA AGGCACGGAG CATTCGGGCG ACGCCGGCAT GCTGCCGCCG
GAATGGCTGG ACCAGGAGAT GCTGGCCTCG GCCCTGCGTG CCGTCGGCCG CAGCACGGGC
ACCAGCCTGC TGACCTATGG CGTGCCCCAG GGCTATCTGC CGCTGCGCCA GCAGATCGCC
TCGGTGCTGC AGGCCCAGGA CGTGCCCGCC CACCCCGAGG CCCACCTGAT GACCGTGGCC
GGCGCCACCC AGGGCCTGGA CCTGATCGTG CGCAGCCTGG TGCGGCCCGG CGATACGGTG
CTGGTGGAAG ACCCGGGCTG GTTTCTCATT TTCGGCCGGC TCAACGCCCT GGGCGTGAAC
GTGGTCGGCG TGCCCCGCCT GCCCGGCGGC CCCGACGTGG AGGCGCTGGA GCGGCTGGCC
CGCCAGCACC AGCCCCGGCT TTTCATCCTC AACACGGCCG TGCACAACCC CACGGGCCAG
ACCCTGTCGG CCGGCGTGGC CCACGAGGTG CTGCGCATTG CCGAGCGCCA CGACTTCTAC
CTGGCCGAGG ACGACACCTA CTCCGACTTC CTGCCCGGCG TGCCCGTGCG CCTGGCTGCC
ATGGACCGGC TGCAGCGCGT GCTCCTGGTG GGTGGCTACT CCAAGACCCT GGCCGGCAGC
CTGCGCGTGG GCTATGTCGC GGCGCACACC GACCTGATAC GGCGGCTGAC CGACCTCAAG
CTGCTGGGCG GGCTGACCAC GGCGCTGCCG GGCGAGCAGG TGGTGCACCG CGTGCTGGCC
GATGGCCAGT ACCGCAAGCA TGTGGACCGC CTGCGCGAGC GCGTGGACCG CGCGCGCAAC
CGCTGCCTGC GCATGCTCGA AGCCCTGGAC TGCCGCGCCC CGCACGAGCC GCAGGCCGGC
ATGTTCGCCT GGGTGGACTG CGGCGTGGAC TCGGAGGTGC TGGCCCGCCA TGCCGCGCCG
CAGGGCCTGC TGCTGGCACC GGGCCTGCTG TTTTCGCCCA GGCAGGCCGC AGGCAGCATG
CTGCGCATTC CCGTGCCCAT GGTGGAGCAG CCCCAGACCT GGAAGATCCT TGGCCACCTG
CTGGCGCAGC ACCGTGGCGG TGGTGGATGA
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| Protein sequence | MTLTLDPAAT LKEAQAQQTP QTSSASSATA FQAAAPWRPL RSSDLSLVEQ LVDHYGGLIR
HHGLRAGSRL PSVRALAQQA GVSRDTVVQA YDRLAAQGLV HSRRGSGVFV SARRAAQAVP
RASHGLPTLE QGAAFDTAFL LRSMFREGTE HSGDAGMLPP EWLDQEMLAS ALRAVGRSTG
TSLLTYGVPQ GYLPLRQQIA SVLQAQDVPA HPEAHLMTVA GATQGLDLIV RSLVRPGDTV
LVEDPGWFLI FGRLNALGVN VVGVPRLPGG PDVEALERLA RQHQPRLFIL NTAVHNPTGQ
TLSAGVAHEV LRIAERHDFY LAEDDTYSDF LPGVPVRLAA MDRLQRVLLV GGYSKTLAGS
LRVGYVAAHT DLIRRLTDLK LLGGLTTALP GEQVVHRVLA DGQYRKHVDR LRERVDRARN
RCLRMLEALD CRAPHEPQAG MFAWVDCGVD SEVLARHAAP QGLLLAPGLL FSPRQAAGSM
LRIPVPMVEQ PQTWKILGHL LAQHRGGGG
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