| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3617 |
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| Symbol | |
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| ID | 5749201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3979438 |
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| End bp | 3980643 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298718 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_001564636 |
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| Protein GI | 160899054 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00115899 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0503817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCC TGCTCTCCCG ACTCCAGCCC TACCCGTTTG AGCGTCTTCG CAAACTGTTC
GCCGGGGTCC AGCCACCGGC GGGCGTGCGC CCCATCAGCC TTGGCATCGG AGAGCCCCGC
CATGCCACGC CGGCGTTCAT CGAACAGGCG CTGAGCGCCG ACCTCGGCGG CCTGGCCAAG
TACCCCGCCA CGGCCGGCGA GCCCGCGCTG CGCGAGGCCT GCGCCCAGTG GGCTCGCCAG
CGCTATGGCA TTGCCCTGGA CGCCGCCACC CAGGTGCTGC CAGTCAACGG CTCGCGCGAG
GCACTGTTTG CCTTCACCCA GGTGGTGGTG GATGCCAGCC AGGACGGCGC GCGCGTGATC
TGCCCCAACC CGTTCTATCA AATCTACGAA GGCGCCACCC TGCTGGCCGG CGCCCAGCCG
TACTACGCGC CCAGCGACGC CGCGCGCAAC TTCGCAGTGG ACTGGGACAG CGTGCCCGCC
GACGTGTGGG AAAAGACCCA GCTGATCTTC GTGTGCTCGC CCGGCAACCC CACGGGCGCG
GTGATGCCGC TGGCCGAGTG GGAAAAGCTG TTTGCGCTGT CCGACCGCTA CGGCTTCGTG
ATTGCCAGCG ACGAGTGCTA CAGCGAGATC TATTTCGACG GCACCGCCCC CCTGGGCGGC
CTGGAAGCCG CGCAGCGCCT GGGCCGCACG GACTACAAAA ACCTGCTGAT GTTCACCAGC
CTGTCCAAGC GCAGCAATGT GCCCGGCCTG CGCAGCGGTT TCGTGGCGGG CGATGCGGCC
CTGATCAAGG CCTTTTTGCT GTACCGCACC TACCACGGCG GTGCCATGAG CCCCGTGGTG
CAGACGGCCA GCATCGCGGC CTGGGGCGAC GAGGCCCATG TCGAGGAAAA CCGCCGCCTG
TACCGCGAAA AGTTCAACCA GGTCACGCCC GTGCTGGCGC GCGTGATGAA TGTGCGCCTG
CCCGACGCAA GCTTCTACCT GTGGGCCGGC ATTCCCGAAT CGCTGGGCCT GGACGACGCC
GACTTTGCAC GCGAGCTGTA TGCCGCCACC GGCGTGACCG TGCTGCCCGG CAGCTACCTG
GCGCGCGAAG CCAATGGCCG CAACCCCGGC GCCGGGCGCG TGCGCATGGC CCTGGTGGCC
GAGACCGCAG AATGCCTGGA AGCCGCCCAG CGCATTGCAC AGTTCATAGA ATCGCGCCAG
CGCTGA
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| Protein sequence | MNPLLSRLQP YPFERLRKLF AGVQPPAGVR PISLGIGEPR HATPAFIEQA LSADLGGLAK
YPATAGEPAL REACAQWARQ RYGIALDAAT QVLPVNGSRE ALFAFTQVVV DASQDGARVI
CPNPFYQIYE GATLLAGAQP YYAPSDAARN FAVDWDSVPA DVWEKTQLIF VCSPGNPTGA
VMPLAEWEKL FALSDRYGFV IASDECYSEI YFDGTAPLGG LEAAQRLGRT DYKNLLMFTS
LSKRSNVPGL RSGFVAGDAA LIKAFLLYRT YHGGAMSPVV QTASIAAWGD EAHVEENRRL
YREKFNQVTP VLARVMNVRL PDASFYLWAG IPESLGLDDA DFARELYAAT GVTVLPGSYL
AREANGRNPG AGRVRMALVA ETAECLEAAQ RIAQFIESRQ R
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