Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3608 |
Symbol | |
ID | 5749192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3967749 |
End bp | 3969812 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641298709 |
Product | ABC transporter related |
Protein accession | YP_001564627 |
Protein GI | 160899045 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.100909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0123712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGCC TTCGCAACAT TACCCTGCGC CGCGGCACCC GCGTGCTGCT GGACAGCACC TCCGTCTCCA TCAACCCTGG TGAAAAAGTC GGCCTTGTCG GACGCAATGG CGCCGGCAAG TCCAGCCTGT TCGCCCTGCT CAACGGCAGC CTGGCCGAGG ACGGTGGAGA GTTCTCCATC CCTTCGCAAT GGCGCCTGGG CCAGGTCGCG CAGAACATGC CAGAGACCTC GGAGACGGCC ACCCAGTTCG TGCTGGACGG CGACACCCGC CTGAGCGAGC TCAACGCCCA GCTCGCGGCC GCCGAGGCCA GCGAGGACGG CATGGCCATT GCCCACGCCC ACGTGGACCT GGCCGACGCC GGCGCGCATG ATGCCGTGCC GCGCGCCCAG GCCCTTATCC TGGGCCTGGG CTTCAAGGTC TCCGAGCTGG AGCACCCCGT CAACAGCTTC TCCGGCGGCT GGCGCATGCG CCTGCAGCTG GCGCGCGCGC TGATGTGCCC CTCCGACCTG CTGCTGCTGG ACGAGCCCAC CAACCACTTG GACCTGGACG CCCTGGTCTG GCTGGAAGCC TGGCTCAAGC GCTACCCCGG CACCCTGGTC GTGATCAGCC ATGACCGCGA ATTCCTGGAC GCCATCACCA ACACCACGCT GCACATAGAA AACGCGCAGG TCACGCGCTA TGGCGGCAAC TACAGCAAGT TCGAGGAACT GCGCGCCCAG CAGATCCTGC TGCAGCAGGC CTCGTTCGAG CGCCAGCAGG ACAAGATCGC CCACCTGCAG AAATTCATCG ACCGCTTCAA GGCCAAGGCC TCCAAGGCCA AGCAGGCGCA AAGCCGCGTC AAGCAGATCG AGCGCATGGA AAAGGTCGCA CCCATGCTGG CCAGCGCCGA TTTCACCTTC GAGTTCAAGC CGCCGGCCAA CCTGCCCAAC CCCATGCTGG CGATCACGGA CGCCGCATTC GGCTACGTGG ACGACGAAGG CCAGGCGACC ACCATCCTGC GCGGCGTCAA CCGCTCGGTG CTGGCGGGCC AGCGCATCGG TATCCTGGGC GCCAACGGCC AGGGCAAGTC CACCCTGGTC AAGACCATTG CGCGCGAGAT GAAGGCGCTG GCCGGCACCG TGACCGAAGG CAAGGGCCTG AACATCGGCT ACTTCGCCCA GCAGGAACTG GATGTGCTGC GTCCCGGCGA AAACCCCATG GAGCACATGA TCCGCCTGGC ACGGGACACC GGCGCCACCG GCCCGCAGGC CCGCGAGCAG GACCTGCGCA GCTACCTGGG CACGTTCAAC TTCAGCGGCG ACATGGTCAA GCAGGCCGTG GGCAGCATGA GCGGCGGCGA AAAGGCCCGC CTGGTGCTGG CCATGATCGT CTGGCAGCGC CCCAACCTGC TGCTGCTGGA CGAGCCCACC AACCACCTGG ACCTGGCCAC GCGCGAGGCC CTGGCCATGG CGATCAACGA CTTCGACGGC ACCGTCATGC TGGTCAGCCA CGACCGCGCG CTGCTGCGCT CGGTCTGCGA GGACTTCTGG CTGGTCGGCC GTGGCGTGGT CGGCCCCTTC GACGGCGACC TGGACGACTA CCAGCGCTAC CTGCTGGAAG AATCCCGCCG CCTGCGCGAG GAAGCCCGCA AGGCCGAACA GGCGGCTGCG GCCACCAGCA AGGCGGCAGC GCAGGTGGAG CCCGCAGCAC ATGCAGCACC TGCAGTGCAG GCCCCCGTGG CTGCTGCGCT GGCCCCGGCC CCCGCTGCCC CGTCCACGCC CCCGGCCGCC AGTGCCGGAG ACCAGCGCGA GCAACGGCGC CTGGCCGCCC TGGCCCGCCA GCAGATGGCC GAAAAGACCC GGCCGTTCAA GAAGGAACTG GAACAGCTGG ACAAGCGCCT GCCCCAGCTG CAGGCCGAGC GCACGCGGCT CGAAGGCCTG CTGAGCCAGC CCATCTCGCC CGCCGACATG GCCGAGACGG GCCGCAGCCT CAAGGCCTGC AACGACGAGA TAGACAGCCT GGAAGAGCGC TGGCTGGAAC TGAGCGAGCA GATCGAGCAG CTGTCGGCCG CGATTTCCGA CTGA
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Protein sequence | MISLRNITLR RGTRVLLDST SVSINPGEKV GLVGRNGAGK SSLFALLNGS LAEDGGEFSI PSQWRLGQVA QNMPETSETA TQFVLDGDTR LSELNAQLAA AEASEDGMAI AHAHVDLADA GAHDAVPRAQ ALILGLGFKV SELEHPVNSF SGGWRMRLQL ARALMCPSDL LLLDEPTNHL DLDALVWLEA WLKRYPGTLV VISHDREFLD AITNTTLHIE NAQVTRYGGN YSKFEELRAQ QILLQQASFE RQQDKIAHLQ KFIDRFKAKA SKAKQAQSRV KQIERMEKVA PMLASADFTF EFKPPANLPN PMLAITDAAF GYVDDEGQAT TILRGVNRSV LAGQRIGILG ANGQGKSTLV KTIAREMKAL AGTVTEGKGL NIGYFAQQEL DVLRPGENPM EHMIRLARDT GATGPQAREQ DLRSYLGTFN FSGDMVKQAV GSMSGGEKAR LVLAMIVWQR PNLLLLDEPT NHLDLATREA LAMAINDFDG TVMLVSHDRA LLRSVCEDFW LVGRGVVGPF DGDLDDYQRY LLEESRRLRE EARKAEQAAA ATSKAAAQVE PAAHAAPAVQ APVAAALAPA PAAPSTPPAA SAGDQREQRR LAALARQQMA EKTRPFKKEL EQLDKRLPQL QAERTRLEGL LSQPISPADM AETGRSLKAC NDEIDSLEER WLELSEQIEQ LSAAISD
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