Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3584 |
Symbol | |
ID | 5749168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3932010 |
End bp | 3932942 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641298685 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001564603 |
Protein GI | 160899021 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.353088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00946106 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCACAA ATCAAGCCCT GCCCCTGTTC GGAGAAATGG CCATCTTCGT CAAGGTGGTG GACACGGGCA GCTTCTCCGA GGCCGCACGC CAGCTGGGCA GCACGCCATC GGCCACCAGC CGGGGCGTGG CGCGGCTGGA AAGGGCACTG GGTCTGCGCC TGCTGGAACG CACCACGCGC AAGCTGCGCC TGAGCGAGGC CGGCCGCGAG GTGCATGCGC GCTGCCTGGA CATGGTGGGC GCCGCCCAGG CCGTCATGGC CGCGTCCCTG CGGCAGGACG CGCAGCCGCG CGGCCTGGTG CGCATCAGCG TGCCCAAGGC CGTGGGCCGT ACCGTGGTCC ATCCCCACAT GCCCGACTTC CTGGCCCTGT ATCCCGAGGT CGACGTGCAG ATGCGGCTGG AAGACCGCTA CATGGACCTG ATCGACGACC CTGTGGACCT GGCCATACGC ATCACCAACC ACCCGCCGCC GGGACTCATG GGCCGCCACC TGATGGACAT CGACCATCTG CTGTGCGCCT CGCCCCAGTA CCTGGCCCGG CACGGCACGC CCGTGCATCC GCTGGAGCTC AAGGCCCACA GCTGCATCTA CCTGGGGGAG GAGCCCGGCG ACGCGCACTG GAAGCTGCGC GGCCATGGCA AGACCGTCAC CGTGGCCGTG CGCGGGCGCT ATGCCGCCAA CCACACCGGT GTGCGGCTGG ACGCCGTGCT GCAGCACATC GGCATCGCCA GCCTGCCCCG CTTCACGGCA CGCGAGGCCC TGGCGGACGG GCGCATCGTG CAGGTGCTGC CGGACTGGAA CTTTCTGCCC AACTACAGCG GCCAGCTGTG GATTCTTCAC CCGCCCACGC GCCACCTTCC GCTCAAGCTG CGCGTGCTGA TGGATTTCCT TGCTGAACGG CTGGGCGGGG TTGATGGGCT GCAGTTTTCA TGA
|
Protein sequence | MSTNQALPLF GEMAIFVKVV DTGSFSEAAR QLGSTPSATS RGVARLERAL GLRLLERTTR KLRLSEAGRE VHARCLDMVG AAQAVMAASL RQDAQPRGLV RISVPKAVGR TVVHPHMPDF LALYPEVDVQ MRLEDRYMDL IDDPVDLAIR ITNHPPPGLM GRHLMDIDHL LCASPQYLAR HGTPVHPLEL KAHSCIYLGE EPGDAHWKLR GHGKTVTVAV RGRYAANHTG VRLDAVLQHI GIASLPRFTA REALADGRIV QVLPDWNFLP NYSGQLWILH PPTRHLPLKL RVLMDFLAER LGGVDGLQFS
|
| |