Gene Daci_3584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3584 
Symbol 
ID5749168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3932010 
End bp3932942 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content69% 
IMG OID641298685 
ProductLysR family transcriptional regulator 
Protein accessionYP_001564603 
Protein GI160899021 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.353088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00946106 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACAA ATCAAGCCCT GCCCCTGTTC GGAGAAATGG CCATCTTCGT CAAGGTGGTG 
GACACGGGCA GCTTCTCCGA GGCCGCACGC CAGCTGGGCA GCACGCCATC GGCCACCAGC
CGGGGCGTGG CGCGGCTGGA AAGGGCACTG GGTCTGCGCC TGCTGGAACG CACCACGCGC
AAGCTGCGCC TGAGCGAGGC CGGCCGCGAG GTGCATGCGC GCTGCCTGGA CATGGTGGGC
GCCGCCCAGG CCGTCATGGC CGCGTCCCTG CGGCAGGACG CGCAGCCGCG CGGCCTGGTG
CGCATCAGCG TGCCCAAGGC CGTGGGCCGT ACCGTGGTCC ATCCCCACAT GCCCGACTTC
CTGGCCCTGT ATCCCGAGGT CGACGTGCAG ATGCGGCTGG AAGACCGCTA CATGGACCTG
ATCGACGACC CTGTGGACCT GGCCATACGC ATCACCAACC ACCCGCCGCC GGGACTCATG
GGCCGCCACC TGATGGACAT CGACCATCTG CTGTGCGCCT CGCCCCAGTA CCTGGCCCGG
CACGGCACGC CCGTGCATCC GCTGGAGCTC AAGGCCCACA GCTGCATCTA CCTGGGGGAG
GAGCCCGGCG ACGCGCACTG GAAGCTGCGC GGCCATGGCA AGACCGTCAC CGTGGCCGTG
CGCGGGCGCT ATGCCGCCAA CCACACCGGT GTGCGGCTGG ACGCCGTGCT GCAGCACATC
GGCATCGCCA GCCTGCCCCG CTTCACGGCA CGCGAGGCCC TGGCGGACGG GCGCATCGTG
CAGGTGCTGC CGGACTGGAA CTTTCTGCCC AACTACAGCG GCCAGCTGTG GATTCTTCAC
CCGCCCACGC GCCACCTTCC GCTCAAGCTG CGCGTGCTGA TGGATTTCCT TGCTGAACGG
CTGGGCGGGG TTGATGGGCT GCAGTTTTCA TGA
 
Protein sequence
MSTNQALPLF GEMAIFVKVV DTGSFSEAAR QLGSTPSATS RGVARLERAL GLRLLERTTR 
KLRLSEAGRE VHARCLDMVG AAQAVMAASL RQDAQPRGLV RISVPKAVGR TVVHPHMPDF
LALYPEVDVQ MRLEDRYMDL IDDPVDLAIR ITNHPPPGLM GRHLMDIDHL LCASPQYLAR
HGTPVHPLEL KAHSCIYLGE EPGDAHWKLR GHGKTVTVAV RGRYAANHTG VRLDAVLQHI
GIASLPRFTA REALADGRIV QVLPDWNFLP NYSGQLWILH PPTRHLPLKL RVLMDFLAER
LGGVDGLQFS