| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3582 |
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| Symbol | |
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| ID | 5749166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3928928 |
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| End bp | 3930973 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641298683 |
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| Product | Fis family proprionate catabolism activator |
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| Protein accession | YP_001564601 |
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| Protein GI | 160899019 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.181537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0169262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAA TAATCGGTTG CATGAATGAA TCAGTCGTGC CCCCTGTCCC TGGAACCCCG
TCCGGCCCCC GCGCGGCATG GCCCCGTGTC GTCACCATAG GCCGCCACCG CATCGGCCGC
GTGCTGGAGC GCATGTCCCT GGCGGTGGGC GACCAGGTGC GTGTGGAGCA TGTCAGCGCG
GCCTTTGACG ACGCCGTGCA GGCCGTGCGT GCGCTGCAGG CGGTCGAGCC CATAGACGCC
CTGGTGGCCG CCGGCGCCAG TGGTGCCTGG GTGCGCGAGC ATGTCGACAT TCCCGTGGTC
ATGATCGAGG TGCGCGGCTT CGATCTGCTG CAGGCGCTGG CCAGCGCGCG GGAATTGGCG
CAGGCGGGCG GCACGCCGCG CATCGGGCTG GTGTCGTTTG ACCATCCCTC GCCTCACCTG
GCCCAGTTCG ACGCGCTGTT CGGCGCCGGC ATTGCCCAGT TCAGCTACCA CGGGCCCGAG
GATGCCCAGG CCTGCGTGCG TGCGCTGCAG GCCGCAGGCG TGGGTGCCGT GGTCGCGCCA
GGTCTGGTTG CCGACCTGGC CGAGCAGGCC GGCATTCCCA GCGTGCTGCT GTACTCCGAC
GGCGCCGTGC TGCAGGCCCT GCGCGACGCG GTGCTGCTGG CCCGCCACCG CCATGCCGAG
CGTGCCCGCC ACCAGCGGCT GGAAACCGTG CTTGGCCAGT TGCAGGACGG CGTGGTCGCC
GTGGATACGC AAGGCTGCAT CCAGGCACTG AACCCCACCA TGGCAGCCCT GCTGGGAGCG
CCCGCCAGGG CGCTGCATGG CCGGCTGCTG GACGAGGTGG CGCCCGCGCT GGCGCTGGCA
CAGGCGCTGC AGTCGCAGTC CCTGGAGCCC GAAGGCAGTG AAGACGTGGT CCAGCTGGCC
ATGCGCACCC TGGTGGTACG GCGCGCACCC ATCGTGGAAA ACGGCCAGCT CACGGGCGCC
TTGCTGGTCT GCCGCGACCC CGCCACCATC CAGCGCGCCG ACCGCCACCT GCGCGCCAAC
CGCAGCCTGC GCGGCGCGGG CGTGCGCTGG CGCATCGAAG ACTACGCGGG CGACAGTGAA
CCCGCCCAGC GCGTGCGCCG CCTGGCGCGC CAGTTCGCGG CCAGCGATGC CACCGTGCTC
ATCCAGGGCG ACAGTGGCAC GGGCAAGGAG CTGCTGGCAC AGGGCATGCA CCGCGCCAGC
CGGCGCGCCG CCCAGCCCTT TCTGGCCGTC AACTGCGCGG CCCTGGGGGA AAGCCTGCTG
GAGAGCGAAC TCTTCGGCTA CGACGAAGGC GCTTTCACCG GCGCGCGGCG CGGCGGCAAG
ACCGGGCTGA TCGAGGCGGC CCATACGGGC ACCTTGTTCC TGGACGAGAT CGGGGACATG
CCGCTGGCCC TGCAGTCCCG CCTGCTGCGC GTGCTGCAGG AGCGCGAAGT GCTGCGCGTG
GGCTCCACCA CGTCCGTGCC CGTGGACCTG CGCGTCATCG CCGCCACGCA TGCCGATCTG
GCGGCCCTGG TCGAGCGCGG TGAATTCAGG CGCGACCTGT TCTACCGCCT GGCCGTGCTG
CGCCTGGCCA TGCCCGGACT GCACGAACGC GGACAGGGCG ATGTCCAGGC CCTGGCCCGC
ACCATGCTTG CGCGGCGTTT GCGCACGCAG TCACTGCAGG CCGAGTCCTC TTCACTGGAG
CCCTTGCTGG AAGCCCTGCT GGATTTGGCC GCCGCGCACC GCTGGCCCGG CAATGCGCGA
GAGCTGGACA ACTGGGTGGA ACGCCTGCTG GCCTGCCGCC ACGACCTGCG TGACGGCGCG
GGCCGCGTGG ACATGGGCCG GTTGCGGGAG CTGTTTCCTG AATGCGACGG GGCTGGGCAG
GGTACCGTTC AGGCCCTGCC AGCGCAGCAG CGGCAACTGC AACTGCGCGA GGCCCGTCGC
GATGCCGAGC GCCAGCGCAT GCGCGAAGTA CTGGAGCAGG TGCAGGGCGA CCAGCGCCGC
GCCTGCGAGA TCCTGGGCAT CAGCCGGGCC ACGCTGTGGC GCAGGTTGCG TAGCCAAAAC
GACTGA
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| Protein sequence | MNEIIGCMNE SVVPPVPGTP SGPRAAWPRV VTIGRHRIGR VLERMSLAVG DQVRVEHVSA
AFDDAVQAVR ALQAVEPIDA LVAAGASGAW VREHVDIPVV MIEVRGFDLL QALASARELA
QAGGTPRIGL VSFDHPSPHL AQFDALFGAG IAQFSYHGPE DAQACVRALQ AAGVGAVVAP
GLVADLAEQA GIPSVLLYSD GAVLQALRDA VLLARHRHAE RARHQRLETV LGQLQDGVVA
VDTQGCIQAL NPTMAALLGA PARALHGRLL DEVAPALALA QALQSQSLEP EGSEDVVQLA
MRTLVVRRAP IVENGQLTGA LLVCRDPATI QRADRHLRAN RSLRGAGVRW RIEDYAGDSE
PAQRVRRLAR QFAASDATVL IQGDSGTGKE LLAQGMHRAS RRAAQPFLAV NCAALGESLL
ESELFGYDEG AFTGARRGGK TGLIEAAHTG TLFLDEIGDM PLALQSRLLR VLQEREVLRV
GSTTSVPVDL RVIAATHADL AALVERGEFR RDLFYRLAVL RLAMPGLHER GQGDVQALAR
TMLARRLRTQ SLQAESSSLE PLLEALLDLA AAHRWPGNAR ELDNWVERLL ACRHDLRDGA
GRVDMGRLRE LFPECDGAGQ GTVQALPAQQ RQLQLREARR DAERQRMREV LEQVQGDQRR
ACEILGISRA TLWRRLRSQN D
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