Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3579 |
Symbol | |
ID | 5749163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3925796 |
End bp | 3926656 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641298680 |
Product | PEP phosphonomutase |
Protein accession | YP_001564598 |
Protein GI | 160899016 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00948814 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00984431 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACACCA AGCAACAACT CAAGGCCCTG GCCGAAGCGC GCCGCGGCGT GCTCGTGCCC GGCGCATTCA ACGCGCTGTC CGCGCGCGTC GTGGCCGATC TCGGCTTCGA GGCCATCTAT GTGACCGGCG CCGGCGTGAC CAACATGTGG TTCGGCCTGC CCGACCAGGC CTTCATGGGC CTGACCGACA TCGCCGACCA CACGGCCCGC ATCCGTGACG CCGTGGATCT GCCGCTGATC GTCGATGCCG ACACCGGCTT TGGCAACGCG CTCAACACCT ATCACGCCGT GCGCACGCTG GAGCGCGCAG GCGCCGACTG CATCCAGATT GAAGACCAGA TCAGCCCCAA GCGCTGCGGC CATTTCAACG GCAAGGAAGT GATTTCCACC GACGAGATGC TGGGCAAGAT CAAGGCCGCC GTGGACGCGC GCCGCGACCA GGGCACGCTG ATCATGGCGC GCACCGATGC CTGCGCCACC CAGGGCTTCG AGGCCGCCGT GGAGCGCGCC CAGCGCTTTG CCGAGGCGGG AGCCGACATT CTGTTCGTGG AAGCCGTGAC CCAGGCCGAT GAGATCCGCG CCCTGCCCCA GCTCCTGTCC ACGCCGCAGC TGATGAACAT GGTGATCGGA GGCAAGACGC CCATCACCGA CGCGGGCGAG CTGGCAGACC TGGGCTATGG CCTGGTGCTG TATGCCAACG CGGCCCTGCA AGGCGCCGTG GCCGGCATGC AAAAGGCGCT GGGCCAGCTG CGCAACGAGC GCAGGGTGGA CGAGAACCCC GCTGTGGTCG CCCCCTTTGC CGAGCGCCAG CGCCTGGTCA ACAAGCCGTT CTGGGACGCG CTGGAAAAGA AGTACGAGTG A
|
Protein sequence | MNTKQQLKAL AEARRGVLVP GAFNALSARV VADLGFEAIY VTGAGVTNMW FGLPDQAFMG LTDIADHTAR IRDAVDLPLI VDADTGFGNA LNTYHAVRTL ERAGADCIQI EDQISPKRCG HFNGKEVIST DEMLGKIKAA VDARRDQGTL IMARTDACAT QGFEAAVERA QRFAEAGADI LFVEAVTQAD EIRALPQLLS TPQLMNMVIG GKTPITDAGE LADLGYGLVL YANAALQGAV AGMQKALGQL RNERRVDENP AVVAPFAERQ RLVNKPFWDA LEKKYE
|
| |