Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3562 |
Symbol | |
ID | 5749146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3910223 |
End bp | 3911194 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641298663 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_001564581 |
Protein GI | 160898999 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.252432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0132448 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGAGA GACATCTGGA AGGCAACGAC CGCCGCGCCT TGCATGAGGC CGCCGCCTGG CACGTGAAAT TGCGCGGCGC CTCTGCCACA GAGGGCCTGC AACAGGACTG GCAGAAATGG CATGACGCCG ATCCCGCCCA CCAGCGCGCC TGGCTGCGCG TGCAATCCGT CACCGCGCAA CTGTCGCATC TGCCCGCACC CCTGGCGCGC CAGGCGCTGG GCCGTCGCGC CTCGCCCACC CGCCGCTCCG TGGTGCGCGG CTTGGCTCTG GGCCTGGGCA GCGGCGCCAC GGCCTGGATG GCCTGGAAAG GCGCACCACT GGAAAGCTGG CAGGCCGGGC AGCGCACAGC CACGGGCGAG CGCCGGGATC TAAAGCTGCC CGACGGCTCC CTGGTGGCCC TGGATACGGC AACCGCCTTG GACACCGTTT TCGACGACCG GCAGCGCGTG CTGCGCCTGC ACCGTGGCCG CATCCTCGTC GCCACCGAGC CCGACGCGCT GGGCCGCCCC TTCAGCGTGC AGACCCCGCA AGGCCATGTA CTGGCCCTGG GCACGCGCTT CACGGTCCAT CTTGCGGACG ATGGCCTGTG CCATGTCACC GTGCTGGAAA AGGCCGTGCG CCTGCAGCCT CTGGACGGCG ATGCGCCCTC CGCACAATTG CAGGCCGGAC AGCAGGCCGC CTTCTCGTCC AGCGCCACCC AGCCGCCCAC GTCCGCAGAC CCCTTTGCAG CCAGCTGGCA TGAAGGCGGA CTGGTCGCGC TGGACATGCC GTTGGGCCAG CTGATTGACG CCCTTGCCCG CTACCGGCCC GGCTACCTGG GCTGCTCGGC CGAGGTCGCC GGGATGCTTG TCTCGGGCGC CTTTCCCGTG GATGACACGG ATCGCGCCCT GGCCGCGCTC GTCAGCCGCT TTCCTCTGCA ACTGCGCAGC CGCACCCGCT ATTGGGTGGA GGTGCAAGCG CGATCAAGCT GA
|
Protein sequence | MGERHLEGND RRALHEAAAW HVKLRGASAT EGLQQDWQKW HDADPAHQRA WLRVQSVTAQ LSHLPAPLAR QALGRRASPT RRSVVRGLAL GLGSGATAWM AWKGAPLESW QAGQRTATGE RRDLKLPDGS LVALDTATAL DTVFDDRQRV LRLHRGRILV ATEPDALGRP FSVQTPQGHV LALGTRFTVH LADDGLCHVT VLEKAVRLQP LDGDAPSAQL QAGQQAAFSS SATQPPTSAD PFAASWHEGG LVALDMPLGQ LIDALARYRP GYLGCSAEVA GMLVSGAFPV DDTDRALAAL VSRFPLQLRS RTRYWVEVQA RSS
|
| |