Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3540 |
Symbol | |
ID | 5749125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3890700 |
End bp | 3891131 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641298643 |
Product | DNA polymerase III chi subunit HolC |
Protein accession | YP_001564561 |
Protein GI | 160898979 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2927] DNA polymerase III, chi subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0730184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACTGAAG TGGCCTTCCA TTTCAACGCG CCCGACAAGC TGGCCTATGT CTGCCGCCTG GCGCGCAAGG CACTCAGGCA CCGCACGCAA CTGGTGGTGC TGGGGTCGCC ACCGCTGCTC AAGGCCTTGT CGCCCAGGCT GTGGAGTGTC TCGCCCACCG ACTTCCTGGC CCATGCCGGA GAAGGCGATG GGGCAGACAT CATGGCCTTC TCGCCCATCG TTTTGCTGGA GCGGCTGGAC GGCGCGCCGC ACCACGACAT GCTGGTCAAC CTGGGCGGCG AAGTGCCCGA AGGGTTCGAG CGCTTTGCGC GTGTCGTCGA AGTGGTTTCC GCCACCGACG AGGAAGACCG CCACCTGGCC CGGCAGCGCT GGAAGCACTA TGCGGCCCAG GGTATTTCCA TCAAGCGCCA TGACCTGGTG CTCAAGGAGT AA
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Protein sequence | MTEVAFHFNA PDKLAYVCRL ARKALRHRTQ LVVLGSPPLL KALSPRLWSV SPTDFLAHAG EGDGADIMAF SPIVLLERLD GAPHHDMLVN LGGEVPEGFE RFARVVEVVS ATDEEDRHLA RQRWKHYAAQ GISIKRHDLV LKE
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