| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3525 |
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| Symbol | |
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| ID | 5749110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3871466 |
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| End bp | 3871933 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298628 |
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| Product | rRNA large subunit methyltransferase |
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| Protein accession | YP_001564546 |
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| Protein GI | 160898964 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.144296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0487834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTGT TGATCGTGGC CGTGGGCCAG CATGTGCCCG ACTGGGCGCA GACGGCCTAC
GACGACTATG CCAAGCGCTT TCCCCCGGAG CTCAAGGTGG AGCTCAAGGC CGTCAAGACC
GAGCCGCGTG GCTCCAAGAC GGTCGAGACC CTGTACGCGG CCGAGCGCAA GCGCATCGAG
GCCGCCATTC CGCGCGGCAC GCGCATCGTC GTGCTCGATG AGCGCGGCAC CAATCTGACG
ACCAAGGCCC TGGCCCAGCG CCTGCAGGGC TGGCAGCTGG AGGGCGACGA CGTGGCCCTG
ATCATTGGCG GCCCGGACGG ACTGGACCCC GCCTTCAGGC AGGCTGCGCA CGAGCGCATC
CGCCTGTCGG ACCTGACCCT GCCGCATGCC ATGGTGCGGG TGCTGCTCAT CGAGCAGCTG
TACCGTGCCT GGTCGGTCAA CGCCGGCCAT CCCTACCACC GGGAATAG
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| Protein sequence | MKLLIVAVGQ HVPDWAQTAY DDYAKRFPPE LKVELKAVKT EPRGSKTVET LYAAERKRIE
AAIPRGTRIV VLDERGTNLT TKALAQRLQG WQLEGDDVAL IIGGPDGLDP AFRQAAHERI
RLSDLTLPHA MVRVLLIEQL YRAWSVNAGH PYHRE
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