Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3521 |
Symbol | |
ID | 5749106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3867341 |
End bp | 3868060 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641298624 |
Product | hypothetical protein |
Protein accession | YP_001564542 |
Protein GI | 160898960 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0483995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.126063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGGAC ACAGTAAATG GGCCAATATC CAGCACCGCA AAGGCCGCCA GGACGAAAAG CGCGGCAAGG TCTGGACTCG CATCATCCGT GAAATCATGG TGGCGGCACG CACGGGAGGG GGCGATCTCA GCGCCAACCC GCGCCTGCGC CTGGCGGTGG AAAAGGCCAA GGCGGCCAAC ATGCCGGCCG ACAACATCAA GCGCAACATC GACAAGGCCA CGGGCAACCT CGAAGGCGTG ACCTACGAGG AAATCCGCTA CGAAGGCTAT GGCATCGGCG GCGCGGCCAT CATCGTGGAC ACCATGACCG ACAATCGCGT GCGCACTGTG GCGGATGTGC GTCACGCCTT CAGCAAGTAC GGTGGCAACA TGGGCACGGA AGGTTCCGTG TCCTTCCAGT TCAAGCATGT CGGACAACTG ATCTTCGCTC CCGGAAGCGA CGAGGACCAG ATCATGGAAG TGGCTCTGGA GGCCGGCGCC GAGGACGTGA TCACCGATGA CGAGGGAGCC ATCGAGGTGC TGACCGCACC CGCAGAGTTC GAAACCGTGC GCGACGCGCT GCAGGCCAAG GGCCTGACGC CGGAGGTGGC TGAAGTCACC ATGCGCCCGG AAAACACCAT CGCCCTGCAA GGCGATGACG CAGCCCGCAT GCAAAAGCTG CTGGACATGA TCGAAGACCT GGATGACGTA CAGGACGTCT ACCACAACGC TGAACTATGA
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Protein sequence | MAGHSKWANI QHRKGRQDEK RGKVWTRIIR EIMVAARTGG GDLSANPRLR LAVEKAKAAN MPADNIKRNI DKATGNLEGV TYEEIRYEGY GIGGAAIIVD TMTDNRVRTV ADVRHAFSKY GGNMGTEGSV SFQFKHVGQL IFAPGSDEDQ IMEVALEAGA EDVITDDEGA IEVLTAPAEF ETVRDALQAK GLTPEVAEVT MRPENTIALQ GDDAARMQKL LDMIEDLDDV QDVYHNAEL
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