Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3508 |
Symbol | |
ID | 5749093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3854881 |
End bp | 3855654 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641298611 |
Product | trans-aconitate 2-methyltransferase |
Protein accession | YP_001564529 |
Protein GI | 160898947 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.510981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.74985 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTGGT CCGCAAAGCA GTACACAACG TTCGAGCAGG AACGCACGCG CCCCGTGCGC GACCTGGTGG CCGCCATTCC CGACCTGCCT GGCCGCGCCG TGCGGCTGGC TGTGGACCTG GGCTGCGGCC CCGGCAACTC CACCGAGGTC CTGGCCCAGC GCTTCCCCGG GGCCACCGTG ACGGGACTGG ACAATTCCGA GGACATGCTG GATGCCGCAC GCAAGCGGCT GCCGGGCACG GCCTTCTCAC TGGCCGACAT CGCCACCTGG CAGCCCGACC AGCCGCAGGA CGTGATCCTG GCCAATGCCT CGCTGCAGTG GCTGCCCGAC CACCAGCAGC TTTACCCGCG CCTTGTCAGC CACCTGGCAC CCGGTGGCAG CCTGGCCGTG CAGACGCCGG ATAACCTGGA AGAACCGGCC CACCGGCTGG CGCGGGAGGT GGCCGCCAGC GGCCCCTGGG CCGCCACGAT TGGAGATGTG CGCCACCCCG CACGGCACAG CGCGGACTTC TACTACGCCC TGCTTCGCCC GCACTGCAGC AACGTGGATG TCTGGCGCAC CACCTACTTC CACCCGCTGG CGGGCAGCCA TGCCGCGGTG GTTGAGTGGT TCAAGGGTTC GGCGCTGCGT CCCTTCGTCG CGCCGCTGGA CGAGGAGCAA AAGGCCGGCT TCTACGCAGC GTATCTGCAG GCCATCTCCC AGGCCTACCC CGCGCTGGAC GATGGCACGG TGCTGCTGCC CTTCCCAAGG CTGTTCATCG TGGCCAGCCG CTGA
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Protein sequence | MTWSAKQYTT FEQERTRPVR DLVAAIPDLP GRAVRLAVDL GCGPGNSTEV LAQRFPGATV TGLDNSEDML DAARKRLPGT AFSLADIATW QPDQPQDVIL ANASLQWLPD HQQLYPRLVS HLAPGGSLAV QTPDNLEEPA HRLAREVAAS GPWAATIGDV RHPARHSADF YYALLRPHCS NVDVWRTTYF HPLAGSHAAV VEWFKGSALR PFVAPLDEEQ KAGFYAAYLQ AISQAYPALD DGTVLLPFPR LFIVASR
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