| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3505 |
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| Symbol | sbcB |
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| ID | 5749090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3851506 |
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| End bp | 3852945 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641298608 |
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| Product | exonuclease I |
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| Protein accession | YP_001564526 |
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| Protein GI | 160898944 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2925] Exonuclease I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00584521 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.826797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCATA CCTTCTTCTG GCACGACTAC GAGACCTTCG GCGCCCAGCC GCGCTATGAC
CGGCCCGCGC AATTCGCGGG CATCCGCACG GATGCGGAAC TCAATGAAAT CGGCGAACCC
GTCATGTGGT ACTGCCAGCC GGCAGGCGAC TACCTGCCCG ATCCGCAGTC CTGCCTGATC
ACCGGCATCA CCCCCCAGCA ATGCCTGGAG CAGGGCATGC CCGAGGCCCA GTTCGCCGCC
CGCATCGAGG CAGAACTGGC CCAGGCAGGC ACCGTGGGCG TGGGCTACAA CACCATACGT
TTTGACGACG AGATCACGCG CTTCATGTTC TGGCGCAACC TCATCGACCC CTATGCGCGC
GAATGGCAAA ACGGCTGCGG GCGCTGGGAC CTGCTCGACG TGGTGCGCAT GGTCTATGCG
CTGCGCCCCG AAGGCATTGT CTGGCCGAAA AAGGAGGATG GATCCCCAAG CTTCAAGCTC
GAGGACCTGG CCCGCGCCAA CGGCCTTCTG CACGAAAAGG CGCACGACGC GCTGTCCGAC
GTGCGCGCCA CCATCGGGCT GGCGCGGCTG ATCCGCAAGG TCCAGCCCAG ATTGTTCGAC
TTCGCCTTCT CGCTGCACAA GAAGGACCGC GTGCTGCAGG AAATGGGCCT GCCGGCCGAG
CCGGCGCATG CACGGCCCTT CCTGCACGTC AGCGGCATGA TCCGGCCCGA GCGCGGCTGC
ATCGCCGTCA TGTGGCCGCT GGCCACGCAC CCCACCAACA AGAACGAGAT CATCTGCTGG
GATCTGGCGC AGGACCCGTC CGAGCTGGCC TCCATCGACG TGGACACGCT GCGCCTGCGC
CTGTTCTCGC GCGCTGCCGA CCTGCCCGAA GGCATGCAGC GCCTGCCCAT CAAGAGCATC
CACGTCAACA AGTCGCCCAT GGTGGTCGGC AGCCTCAAGA CGCTGAGCGC GGCCATGGCC
GCGCAATGGG GCATCGATGT GGAGCAGTGC ATGGGCCATG CGGCCATTGC ACGTGACCTG
CCCGACATGA GCGCGCTGTG GCGTGCCGTT CACCAGCGCC CTGCGCAGGA GGGGCTGGAT
GCCGACCAGG ACCTGTATGG CGGCTTTGTG GGCAACGAGG ACCGGCGCCG TCTCAACCAC
CTGCGCAGCC TGTCTGCGCA GGAGCTGGCG CTGGACCGCA CGGGCTTCGA CGATGCCCGC
CTGACCGAAC TGCTGTTCCG CTACCGCGCC CGCAACTTCC CCGCCAGCCT GAACCCTGCC
GAGCGCCAGC GCTGGCTGCA GCACTGCGCT GCCTGCCTGA TCGAAGGCAA GGGCGGCGCA
CGCACGGCCG AGCAGATGTT TGCCATGGTC GATCAGCTAT CGGAAACCGC CGACGAGCGC
GGAGAGGAAA TCCTGGGGGC GCTGTATGAC TATGCCGAGG CGATCATGCC GGAACTTTAG
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| Protein sequence | MAHTFFWHDY ETFGAQPRYD RPAQFAGIRT DAELNEIGEP VMWYCQPAGD YLPDPQSCLI
TGITPQQCLE QGMPEAQFAA RIEAELAQAG TVGVGYNTIR FDDEITRFMF WRNLIDPYAR
EWQNGCGRWD LLDVVRMVYA LRPEGIVWPK KEDGSPSFKL EDLARANGLL HEKAHDALSD
VRATIGLARL IRKVQPRLFD FAFSLHKKDR VLQEMGLPAE PAHARPFLHV SGMIRPERGC
IAVMWPLATH PTNKNEIICW DLAQDPSELA SIDVDTLRLR LFSRAADLPE GMQRLPIKSI
HVNKSPMVVG SLKTLSAAMA AQWGIDVEQC MGHAAIARDL PDMSALWRAV HQRPAQEGLD
ADQDLYGGFV GNEDRRRLNH LRSLSAQELA LDRTGFDDAR LTELLFRYRA RNFPASLNPA
ERQRWLQHCA ACLIEGKGGA RTAEQMFAMV DQLSETADER GEEILGALYD YAEAIMPEL
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