| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3503 |
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| Symbol | |
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| ID | 5749088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3847594 |
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| End bp | 3849930 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641298606 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
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| Protein accession | YP_001564524 |
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| Protein GI | 160898942 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0375763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.65514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCC AGGAACTGGA AGTCAGCTTG CACATGGCCT TTGTCGAAGC GCGCCAGCAG
CGCCACGAGT TCATCACCGT GGAACACCTG CTGCTGGCCC TGCTGGACAA CCCCAGTGCA
GCGGAAGTGC TGCGCGCCTG CTCAGCCAAC ATCGATGACC TGCGCTCGGC CCTGTCCAAC
TTCATCAAGG ACAACACGCC CCAGGTGGCA GGCTCCGATG AGGTGGACAC ACAGCCCACG
CTGGGTTTCC AGCGTGTGAT TCAGCGCGCC ATCATGCATG TGCAATCCAC CGGCAACGGC
AAGAAGGAAG TCACGGGCGC CAACGTGCTC GTGGCCATCT TCGGTGAGAA GGATTCGCAC
GCCGTCTACT ACCTGCACCA GCAGGGCGTG ACGCGTCTGG ACGTGGTCAA TTTCATTGCC
CACGGCATCA AGAAGGGCGA ACCGCCCGAG CCTGCCAAGG CCGAAAACCC TGCCGAGTCC
GAAGAGGGCG CCGGCGGCGA GCGCAACGAA AAGGCTTCGC CCCTGGAGCA GTTCACGCTG
AACCTCAACC AGGCGGCCAA GGACGGCAAG ATCGATCCGC TGATCGGGCG CGATTACGAG
GTCGAGCGCA CCATCCAGAT CCTGTGCCGC CGCCGCAAGA ACAACCCGCT GCTGGTCGGC
GAGGCCGGCG TGGGCAAGAC GGCGATCGCC GAAGGCCTGG CCTGGCGCAT CACCGAGGGC
AAGGTGCCCG AGGTGCTGAC CGAAGCCGTG GTCTATTCGC TGGACATGGG CGCGCTGCTG
GCGGGCACCA AGTACCGTGG TGATTTCGAG CAGCGCCTCA AGGGCGTGCT CAAGTCGCTC
AAGGACCGGC CCAACGCCAT CCTGTTCATC GACGAAATCC ACACGCTGAT CGGCGCGGGC
GCCGCTTCGG GCGGCACGCT GGACGCGTCC AATCTGCTCA AGCCGGCGCT GTCCAGCGGC
CAGCTCAAGT GCATCGGCGC GACCACCTTC ACCGAGTACC GCGGCATCTT CGAAAAGGAT
GCAGCGCTGT CGCGGCGTTT CCAGAAGGTC GACGTGGTCG AGCCCACCGT GGCCGAGACC
GTGGACATCC TCAAGGGCCT GAAGTCGCGC TTCGAGGAAC ACCACAGCGT GCAGTACGCC
GCCGCCGCCC TGCAGGCTGC GGCCGAGCTG TCGGCCAAGT ACATCAATGA CCGCCACCTG
CCCGACAAGG CCATCGACGT GATCGATGAG GCCGGTGCCG CGCAGCGCAT CATTCCGGTG
GAGCAGCGCA AGCAGACCAT CGACAAGGCC GAGATCGAGG CCATCGTGGC CAAGATCGCG
CGCATTCCGC CTGCCAACGT GTCCAACGAC GACCGCAGCA AGCTGCAGAC GCTGGAGCGC
GACCTCAAGA GCGTGGTCTT CGGCCAGGAC AAGGCGCTGG AAGCGCTGGC CTCCTCGGTC
AAGATGGCGC GCTCGGGCCT GGGCAAGCCG GACAAGCCGA TCGGCTCTTT CCTGTTCTCC
GGCCCCACGG GCGTGGGCAA GACGGAAGCG GCCAAGCAGC TGGCCTACAT CCTGGGCGTG
GACCTGATCC GCTTCGACAT GTCGGAGTAC ATGGAGCGCC ATGCCGTCAG CCGCCTGATC
GGCGCGCCTC CGGGCTATGT GGGCTTTGAC CAGGGCGGTC TGCTGACCGA GGCCGTGACC
AAGAAGCCGC ATTCGGTGCT GCTGCTCGAC GAAATCGAGA AGGCGCATCC GGACATCTTC
AACGTGCTGC TGCAGGTCAT GGACCACGGC ACGCTGACGG ACAACAACGG GCGCAAGGCC
GACTTCCGCA ACGTGATCCT CATCATGACC ACGAACGCGG GCGCCGAGAC CATCAACAAG
GCCTCGATCG GCTTTACCAA CCCGCGCCAG GCCGGCGACG AAATGGGCGA CATCAAGCGC
CTGTTCACGC CGGAGTTCCG CAACCGTCTG GACGCCATCG TCAGCTTCAA GCCGCTGGAC
GAGCAGGTCA TCCTGCGCGT GGTCGACAAG TTCCTGCTGC AACTGGAGCA GCAACTGGCC
GAAAAGCGCG TGGAGGTCAC CTTCACCGAT GCGCTGCGCA AGCACCTGGC CAAGAAGGGC
TTCGATCCGC TCATGGGTGC TCGCCCCATG CAGCGCCTGA TCCAGGACAC CATCCGGCGT
TCGCTGGCCG ACGAGCTGCT GTTCGGGCAA CTGGTCGACG GTGGCCGCCT GGAAGTGGAC
TGGGTGGCCG ACGCCGACGA TGCCGACAAG GGCGAAGTCA AGCTCGACAT CACGCCCCAG
CCCAAGCAGG ACCCGGCGTC CGAGCCGGCC GAGCCCAAAG AGGCCACCGC CGACTGA
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| Protein sequence | MIAQELEVSL HMAFVEARQQ RHEFITVEHL LLALLDNPSA AEVLRACSAN IDDLRSALSN
FIKDNTPQVA GSDEVDTQPT LGFQRVIQRA IMHVQSTGNG KKEVTGANVL VAIFGEKDSH
AVYYLHQQGV TRLDVVNFIA HGIKKGEPPE PAKAENPAES EEGAGGERNE KASPLEQFTL
NLNQAAKDGK IDPLIGRDYE VERTIQILCR RRKNNPLLVG EAGVGKTAIA EGLAWRITEG
KVPEVLTEAV VYSLDMGALL AGTKYRGDFE QRLKGVLKSL KDRPNAILFI DEIHTLIGAG
AASGGTLDAS NLLKPALSSG QLKCIGATTF TEYRGIFEKD AALSRRFQKV DVVEPTVAET
VDILKGLKSR FEEHHSVQYA AAALQAAAEL SAKYINDRHL PDKAIDVIDE AGAAQRIIPV
EQRKQTIDKA EIEAIVAKIA RIPPANVSND DRSKLQTLER DLKSVVFGQD KALEALASSV
KMARSGLGKP DKPIGSFLFS GPTGVGKTEA AKQLAYILGV DLIRFDMSEY MERHAVSRLI
GAPPGYVGFD QGGLLTEAVT KKPHSVLLLD EIEKAHPDIF NVLLQVMDHG TLTDNNGRKA
DFRNVILIMT TNAGAETINK ASIGFTNPRQ AGDEMGDIKR LFTPEFRNRL DAIVSFKPLD
EQVILRVVDK FLLQLEQQLA EKRVEVTFTD ALRKHLAKKG FDPLMGARPM QRLIQDTIRR
SLADELLFGQ LVDGGRLEVD WVADADDADK GEVKLDITPQ PKQDPASEPA EPKEATAD
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