| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3499 |
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| Symbol | |
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| ID | 5749084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3840345 |
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| End bp | 3842519 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641298602 |
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| Product | helicase c2 |
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| Protein accession | YP_001564520 |
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| Protein GI | 160898938 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.285018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCATTCTC TGACCGCCGC CGTGCAGGCG GCCTTCGCGC CGCAAGGCCT GCTGTCGCGC
GCCGAGGCGC TGTTCCTGCC GCGTGAGGGG CAGACCCGCA TGGCCCTGGC CGTGGCCCAG
GCCATCGAGC AGCGCCAGAC CCTGGTGGTC GAGGCCGGCA CGGGCGTGGG CAAGACCTAT
GCCTACCTGG TGCCGGCCCT GCTCAGCGGC CAGCGCGTGC TGGTGTCCAC GGCCACGCGC
GCGCTGCAGG ATCAGCTGTA TGCCCGCGAT CTGCCGCGCC TCGTTGCCGC GTTGGGCATG
CCGCTGCGCA TGGCGCGCCT CAAGGGCCGC AGCGCCTACC TGTGCATGGA GCGGCTGGAG
CGTGTGCGCC AGGGCCGCAC GGCGCCGCAG GACCCGCAGG TGCTGCGCAG CGTGGCCCTG
GTCGAGCGAT GGGCACGCAC CACGCGTACG GGCGACCTGG GCGAGTTGCC CGCGCTGGAC
GAGCGCTCGC CCGCGCTGCC CCTGGTCACT TCCACACGCG ACAACTGCCT GGGTTCCGAC
TGCCCGCATT GGCAGGACTG CCATGTCAAC GTGGCCCGCC GCGCTGCGCT GGAGGCCGAC
GTGGTGGTCA TCAACCACCA CCTCATGTTT GCCGACCTGG ATGTGCGCGA GTCGGGCGTG
GCCCAGTTGC TGCCCAGCGT GGGCGTGGTC GTGGTGGACG AGGCCCACCA GCTCAACGAC
ACCGGCGTGC AGTTCGCGGG CCAGAGCCTG TCGGGCCAGC AACTGACGGG CTATGCCCGC
GATGTGCTGC GCGCCGGCCA GGAACTGGCG CGCGGCATGG CCGACTGGAT GCAGCTTTCG
GCACGTGTGG AGCAGGCCTT GCGCGAGCTG CGCCTGGCGG CAGGCAAGCC CCCGGCGGGC
GGGCGCCTGC CCTGGCAGGG CGTGACGCCG CAGGGGCTGG ACGCGCAGCG CTGGCGCACC
GCCCTGGTGA CGCTGGGGCG CAGCCTGCGG GCACTGCTGG AGCCGCTGGT GCAACTGCAG
GTCAGCGACC CCGAACTGCG CAGGCTGTTC GAGCGCGGCA ACGAGTTGCT GCGGCGCCTG
GCCACCTTTG CCGCCGCCGC CGTGCAGGAC ACGGTGCGCT GGCTGGAGCT GGGCAGCCAG
CAGATGCGCA TGCTGGAGTC TCCGCTGACC ATTGCGCACA TCATGCGCAC GCGGCTGCTG
GGGTTGACGC AGGAGCAGGA GGGATCGGAA GACCAGGAGC GAGAGGATGC ACAGCCCGAG
CCCGAGCCAC AAGAACAGGA AGAAGGCGCG CCCGCGCCCG TTCACGAAGC TGCAGGCCTG
CCCCGGCAGC CCTCGGGCAC CGCGTGGATC TTCACCTCGG CCACGCTGGG TGACGACGAG
CGCCTGAGCT GGTTCACCGA GCCCTGCGGC CTGCGCGAGG CCCAGGTGCT GCGCGTGGAC
AGTCCCTTTG ACTATGCGCG GCAGGCAGCG CTTTACGTGC CCCGGCCCTT TGCCCAGGCC
GGCAGTGCCA CGCATAGCAC CGAGGTGGCG CGCCTGGCGC TGGATGCCGC CCAGCGCCTG
GGCGGGCGCA CGCTGGTGCT GACGACCACG CTGCGGGCGC TGCACGCCAT AGGCGATGCA
CTGCAGCAGT CGCTGGGGCT GTTTGGTGAA CTGGATGTGC TGGTCCAGGG GCAGGCGCCC
AAGCTGGCCT TGATCGAGCG CTTTATCGCG GCCGGAGAAG GCAGGGAAGG CACGGGGGCG
AGCCCGGGGC GGGGCTGCAT TCTCGTGGCC TCGGCCACTT TCTGGGAGGG GGTGGACCTG
CCGGGCGATG CGCTGCAGCT GGTGGTCATC GACAAGCTGC CGTTTCCGCC GCCCGACGAT
CCGCTGGTCG AGGCGCGTTC GCGCAGCCTG GAATCCGTGG GGCGTCAGGC CTTTGCCGAC
TACATGCTGC CCGAGGCCGC CATGGCGCTC AAGCAGGGCG CCGGCCGCCT GATCCGGCGC
GAGACGGATC GCGGCGTACT CGTGGTCTGT GATTCCCGGT TGGCCACCAT GGGTTACGGG
CGGCGGCTGC GTGCCGCGCT GCCGCCCATG CGGACCCTGG TGGACGAGGC GGCCTTTGTT
CAGGCCCTGC AGGCGCTGGC GCAGCCTGCG CCGCAGATCA CCACAGCTTC CACCACGACT
TCTGCTTTGC CGTGA
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| Protein sequence | MHSLTAAVQA AFAPQGLLSR AEALFLPREG QTRMALAVAQ AIEQRQTLVV EAGTGVGKTY
AYLVPALLSG QRVLVSTATR ALQDQLYARD LPRLVAALGM PLRMARLKGR SAYLCMERLE
RVRQGRTAPQ DPQVLRSVAL VERWARTTRT GDLGELPALD ERSPALPLVT STRDNCLGSD
CPHWQDCHVN VARRAALEAD VVVINHHLMF ADLDVRESGV AQLLPSVGVV VVDEAHQLND
TGVQFAGQSL SGQQLTGYAR DVLRAGQELA RGMADWMQLS ARVEQALREL RLAAGKPPAG
GRLPWQGVTP QGLDAQRWRT ALVTLGRSLR ALLEPLVQLQ VSDPELRRLF ERGNELLRRL
ATFAAAAVQD TVRWLELGSQ QMRMLESPLT IAHIMRTRLL GLTQEQEGSE DQEREDAQPE
PEPQEQEEGA PAPVHEAAGL PRQPSGTAWI FTSATLGDDE RLSWFTEPCG LREAQVLRVD
SPFDYARQAA LYVPRPFAQA GSATHSTEVA RLALDAAQRL GGRTLVLTTT LRALHAIGDA
LQQSLGLFGE LDVLVQGQAP KLALIERFIA AGEGREGTGA SPGRGCILVA SATFWEGVDL
PGDALQLVVI DKLPFPPPDD PLVEARSRSL ESVGRQAFAD YMLPEAAMAL KQGAGRLIRR
ETDRGVLVVC DSRLATMGYG RRLRAALPPM RTLVDEAAFV QALQALAQPA PQITTASTTT
SALP
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