Gene Daci_3496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3496 
Symbol 
ID5749081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3837556 
End bp3838659 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content65% 
IMG OID641298599 
ProductAFG1 family ATPase 
Protein accessionYP_001564517 
Protein GI160898935 
COG category[R] General function prediction only 
COG ID[COG1485] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.170583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.858132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTTT CAGTGCGAGA GGCCTACGAG GCCGAACTGG TAGCCAAGGG CTTTCACAGT 
GATCCTGCGC AGTTGCGCGC CGTCGAGGCG CTGCAGCGCT GTGCCGACGA CTGGGCGGTC
TACCGCCAGC GCCGCTCCAA CGCCTTCAAG AAGCTCATCA ACCATCCCGA GATTCCCCGC
GGCGTCTACA TGTACGGCGG GGTCGGGCGC GGCAAGAGCT TTCTCATGGA CTGCTTCTTC
AACGCCGTGC CGCTCAGGCG CAAGGTGCGC CTGCATTTCC ACGAATTCAT GCGCGAGGTC
CACCGCGAGC TCGCCGTGCT GCAGGGCACG CAGAACCCGC TGGACGTGCT GGGTGCCCGC
ATCTCCAAGA AGTACAAGCT GATCTGCTTC GACGAATTCC ACGTGGCCGA CATCACGGAC
GCGATGATCC TGCACCGGCT GCTGGTCTCG CTGTTCGCCA ACGGCGTGGG CTTTGTCACC
ACCTCAAACT TCAAGCCCGA CGAGCTGTAT CCGGGCGGCC TGCACCGCGA CCGCATCCTG
CCGGCCATCG ACCTGCTCAA CGAGCGCATG GAAGTCGTCA ACGTGGACAA CGGCACGGAC
TACCGCCGCC GCACGCTGGA AAACGCCCGG CTCTATCACA CGCCCCTGGG TGCAGAGGCT
GATGCGGCCA TGACCGAAAC CTTCGACAAG CTGGCCGAAG TCAAGGACGA AGACCCCGTG
CTGCACATCG AGGCGCGCGA GATCCGTGCG CGCCGCCGCG CCGGTGGCGT GGTCTGGTTC
GACTTCCGCG AGCTGTGCGG CGGCCCGCGC TCGCAGAACG ACTACCTGGA GATCGCAAGC
CAGTTCCACA CCGTGCTGCT GTCCGACGTG CCCTATATGC CGGTCAACAT GGCATCGCCC
GCGCGTCGCT TCACCTGGCT GGTGGACGTG CTGTACGACC GCAGGGTCAA GCTGGTCATC
TCGGCCGCCG TGCCGCCCGA GCAGCTTTAC ACTGAGGGCC CGCTGGCCCA TGAGTTCCCC
CGTACCGTAT CGCGCCTGAA CGAGATGCAG TCCAAGGAAT TCCTGGCGCT GGAGCGCCGT
GTGGTGGACA CCAGCCTGAC CTGA
 
Protein sequence
MSVSVREAYE AELVAKGFHS DPAQLRAVEA LQRCADDWAV YRQRRSNAFK KLINHPEIPR 
GVYMYGGVGR GKSFLMDCFF NAVPLRRKVR LHFHEFMREV HRELAVLQGT QNPLDVLGAR
ISKKYKLICF DEFHVADITD AMILHRLLVS LFANGVGFVT TSNFKPDELY PGGLHRDRIL
PAIDLLNERM EVVNVDNGTD YRRRTLENAR LYHTPLGAEA DAAMTETFDK LAEVKDEDPV
LHIEAREIRA RRRAGGVVWF DFRELCGGPR SQNDYLEIAS QFHTVLLSDV PYMPVNMASP
ARRFTWLVDV LYDRRVKLVI SAAVPPEQLY TEGPLAHEFP RTVSRLNEMQ SKEFLALERR
VVDTSLT