Gene Daci_3476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3476 
Symbol 
ID5749061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3807683 
End bp3807976 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content63% 
IMG OID641298579 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_001564497 
Protein GI160898915 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.634664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCG ACTACAAGAC ACTGCTGCAG CAGAAAGCCC ATCTCGAAGC CCAGATCGCC 
GAAGTGCTCA AGACCGAGAA GTCCGGAGCC ATTGCCCAGG TGCGCACCAT CATCGACCAA
TACGGATTGA CCGAGGCTGA CGTCTTTCCT TCGTCCAAAG CCAAGGCTGG TGGCGGTTTC
CGCGTGGTCG GCGTCCCCAA GTACCGCGAC CCGGCCACGG GCGCGACCTG GACCGGCCGC
GGCAAGCAGC CCCGCTGGAT CGAAGGCAAG GACCGCACTC CCTTCGCCAT ATGA
 
Protein sequence
MTTDYKTLLQ QKAHLEAQIA EVLKTEKSGA IAQVRTIIDQ YGLTEADVFP SSKAKAGGGF 
RVVGVPKYRD PATGATWTGR GKQPRWIEGK DRTPFAI