Gene Daci_3449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3449 
Symbol 
ID5749034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3783406 
End bp3784881 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content56% 
IMG OID641298552 
Producthypothetical protein 
Protein accessionYP_001564470 
Protein GI160898888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00830472 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG CGCGGTACTG GCGAGCGATC GCCATCTCCA CCTACGCCGC AGCCCACCTG 
GAGCTGAGCG CCTGGCACCT ATACGGCGCG GCCGACCAGC GTGTGGACTC CGCTGCGGCC
CTGACATGCA CCGTTCCCAC GCTGGCCGGA GATGTCTCCA GTCTGCAGGA CGCGGACGTC
GGCACGTCTG TCGTGTTCGA CGCACGCTCG CCAGGGTTCG CTCTTGTCTG GGACTTTGGT
TCGGGCTCGC CTGGTTCTGT GCAATCCGTG CGTTTCGGAT CGGCAGACAC CCAGGGCTCG
TTTCTGTCGG AGTTCACGCT CCAGTATTCC GAGGACGGCA TTTCCTGGAC CTGGCTATCG
ACGACGGGGC GCCACCCATG GCCCGGTCCT CGCGCCATGG GAGAGGTCAC ACAGGTCGTT
TCGGGCGACG AGCATTTCGA CAAGGTGTCG CTGTTGCTGC AAGTGGATGG CGAAAACGGC
TCACTGGATT TTCGGGATAA ATCCGTACCC GAAAAACCTT TAACTGTTTC GGGGGATCTT
GTCGTCAGCA ATGCCGTCAC ATTTTCGGGT CTGAATTCGA TTAGATATGG CGGTGTCGGC
GGGTCTGTTG TATTAAATAA AGCGGAAGAC TTTGATTTTG CCGATCTAGA CTTTACGATC
GAGCTTTGGG CTCAAGTCGA GAATTACCGG AATAATACGT TACTAGGAAA CACGGGTGAA
AGCAACGCCA ATGGATTCCT GCTGCAGTTT ACAGATGTCG GATTTTTGCG CTTCTACGTA
TCTAGCAATA ATTCAATGGC TCTTGACGTA ATAGGGAATG CGTATTACGG GCTGTTCGCA
AAGACCCACG TTGCGGTGTC TCGATCCGGC GGCAGGGTTA GGTTGTTTCT GGGTGGTGTG
AAGTGCGCGG ACGTACCATT TTCGGGGGCG ATTCCCACTG CCTCGGGAGA TTTGAATATT
GGGGGGAATT TAAATTTCTC TGGCTGGCGT TTCGTGAATG GAAATTTGGG CGAAGTTCGG
ATAACAAAAG GGGTGGCGCG ATATACCGAT TCATTCACGC CACCTACAGA TCCGCTGCCC
ACCGGCTCAG GAGGCGGCAA CTTTGATCCG ACCCCACTGA TTACTCGTCG GCGAACCCTG
CAGTATTTCG TTGTTCAATC GTCTACAGGG GAATCATCGG TCGAAACCAT CCCGGCAAAT
GGCACTTTCC CATTCATGGA TGCAGAGTTT GGCGGCAGCG GTCGAATCTT TGGCACGACA
AAAATAAAAG GCACTGTGAG TAACAGCCCC GCCAAATCCC GCGTCGTGCT GTTACGTCAG
CGCGACAGAC TGCTTGTGAG GCAGACATGG TCGGACCCCG ATACAGGTGC ATGGGCGTTT
GAGGGATTGG ATATGCGTCA GCAGTACATA GCCCTTGCCG AAGATGCCGG AGGCAACTTC
CAGGCAGTGG CAGCGCAGCG ATTGGAGGCA GTATGA
 
Protein sequence
MATARYWRAI AISTYAAAHL ELSAWHLYGA ADQRVDSAAA LTCTVPTLAG DVSSLQDADV 
GTSVVFDARS PGFALVWDFG SGSPGSVQSV RFGSADTQGS FLSEFTLQYS EDGISWTWLS
TTGRHPWPGP RAMGEVTQVV SGDEHFDKVS LLLQVDGENG SLDFRDKSVP EKPLTVSGDL
VVSNAVTFSG LNSIRYGGVG GSVVLNKAED FDFADLDFTI ELWAQVENYR NNTLLGNTGE
SNANGFLLQF TDVGFLRFYV SSNNSMALDV IGNAYYGLFA KTHVAVSRSG GRVRLFLGGV
KCADVPFSGA IPTASGDLNI GGNLNFSGWR FVNGNLGEVR ITKGVARYTD SFTPPTDPLP
TGSGGGNFDP TPLITRRRTL QYFVVQSSTG ESSVETIPAN GTFPFMDAEF GGSGRIFGTT
KIKGTVSNSP AKSRVVLLRQ RDRLLVRQTW SDPDTGAWAF EGLDMRQQYI ALAEDAGGNF
QAVAAQRLEA V