| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3426 |
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| Symbol | |
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| ID | 5749012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3753413 |
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| End bp | 3755986 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298531 |
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| Product | P4 family phage/plasmid primase |
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| Protein accession | YP_001564449 |
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| Protein GI | 160898867 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3378] Predicted ATPase |
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| TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00902831 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0299262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTCT CCCCTCCCGA TATCCCCCAG GTGCTGCGCC AGCGTAAGCA GTGGCTCGTG
TGGCGCCTGG TCAAGAAGCC CGATGAACCC AAGCCCCGCA AGGTCCCTTT CTACGCCAAC
GGCGCGCCGC GCAACGGCGA GCAGGGCACG GCTGAGGATC TGGCCCAGCT CACGACCTTC
GACGCTGCAG TGCACGCCGT GCGCGAGCGC GGCTACACCG GCCTGGGCTT CGCGCCCATC
GCCAACGGCG GCATCGTCGC CCTGGACTTC GACGGTTGTG TGTCCGGCGG CCAGATCACA
GACGCACGCA TCGAGGCCCT GATCTCGGAC ACATACGCCG AATTCTCGCC CTCCGGTACG
GGGTTGCGCG CCTTCTACCT GGGCGCCATG GCCAGCCGCA AGGACAACGC CCACAAGTCT
AAGCGCGTTG GCGGGCAGGC TGGCGCAGCG CGCCTCGACG GCCTCTTCGA CATCGAGTTC
TTCGGCCACA ACGGCTTCGT GACGGTCACC GGCAAGGCCA CGCCCGACAC GCAGCTGTGG
GGCCTGCAGG ACACAGTCGC GCCGCTCTCC CAGGGGGTGC AGCAGCTCTA CGCCCAGCGC
TTCGGAGACA CCGGGCCTCT GCCGGCCGTT GGCGCCGTAG CTCTCGCTGG CGAGGCCAAC
TTGGCCGCAC TGGGCCCGGA GAAGCTGGGC TGGACCATGG ACCAGGCGCG CGAGTACCTG
TTCGACTGCA AGGCCAGCGT GTCGCGCGCC GAGTGGCTGA ACGCGCTGAT GGCGCTGCAC
CACGAGTTCG ACGGCTCCGA AGACGCGCTG GACCTGGCCG ACGAATGGAG CGCCACCGGC
GACAGCTACG CCGGCCGCAA GGACGTGGAA GGCCGCTGGG ATTCCTTCGG CCGGGACCGC
GGCGGCGCGC CTATCACCGG CCGGTGGCTG CTGTCCTGGC GCCGGGACCA GATGGCGGCG
AGCAACGACG AGCGCATGCG CGGCGCGCTG GCCGAGATGC AGAGGCTGCT CAAGGAAGCC
CCCGATATGC TCACGCTGCA GACGCGTGTC ATGCCGGACG TGTCGCGGCT GCTGCTCGAA
TTCCCCATCC TGGAGATCGA GGCCTACAGC TTGGTGGCCG GGCGCGCTAA GGAATTCGGC
CTGGCCATCA ACAAGACCGA GTTCAAGAAG CTCATCAAGG TGGAGCGCCC GCCGGCCGCT
GCCGCCGTCG CACCGCTGAC CGAGTTTGGC AACACCGAGC GCATGTTGGC GCGCTACGGT
GACAGCCTGA TGTTCTGCCC GGACACGGCC ACCTGGTACG TCTGGACTGG CGTGTACTGG
CGCACGGCCA TGGGCGGCAA TACCGAGGTC GCCCACTATG CCAAGGAGAC CATCAAGGAT
CTGCCCAGCG AGGCCGCCAG CCACGCTGAC CCGGGCGAGT TCTTCGCCTT CTGCAGCCTG
AGCCAGCGCG CCGCCATGGT GGCGGCCATG GTCAAGCTGG CCGAGAGCGA CCCCCGCGTC
TGCGTGCCGT CCTCGGAGCT GGACAAGCAC AGGCACCTGC TGGGTGTGAA AAACGGTGTG
GTCGACCTGC GCACCGGCGT GCTGATGCCG GCATCTCCCG AACTGCGCAT CACCCTGTCT
GCGGGCTGCG AGTACAACCC AGGGGCGAAG TGCCCGCTCT TCGAGCAGAC CCTGCGCGAT
GTGTTCTTCG ACGACCTGGA GATGGTCGAG TACGTGGCGC GCACGTTCGG CTATGCGCTG
CAGGGCCAGC CGCGCGAGGA CATGATGTTC ATCGCCTTCG GCAACGGCGC CAACGGCAAG
AGCACGATCT TCAACGCCGT GCGCAAGGTC TTCGGCGGCT ACGCGCGCTC GGCCGACGCC
GCCTCGTTCA TCAGCGACGC CATGGGCGGC AACGCCGGTG GGCCGCGGGA AGACCTACTG
CGCCTGCGCG GCGCTCGGTT CGTGTACGTC AACGAGCCGG ACGAGGGCGG CGAGCTGCGG
GAAGGTGCCG TCAAGGCCAT GACAGGCGGC GACGCGATCA CGGCGCGCGG CATTCAGGCC
AAGCACTCGA TCGAGATCGA ACCCACGTGG ACCGTGTACA TGCCCACGAA CCACAAGCCC
ATCATCAAGG GCACCGACAA CGGCATCTGG CGGCGCATGG GCCTGCTGCC CTTCGAGCGC
GACTTCCGCA ACGACCCGCA CATCGTCAAG GACGACCAGC GGCGCGAGAA GCTGGAGGCC
GAGTTGCCCG GCATCCTGGC CCTGATCGTG CGCGCCGGCA TGCGCTACCG CCAGTCCGGG
TTGAATCCCC CGGCCAAGGT GCTGGCTGCC AGCGCCGATT ACCGCAAGGA CATGGACCTG
CTGGGCGAGT GGATCGAAGA GTGCTGCGAG ATCGACGAGA ACCTGCACAC CAAGGTCTCG
GATCTGTGGG AGTCGTGGGA AACCTACGCG CGCCGGCGCG GCCTGGTCCG CTTCATCAGC
TCATCAAAGG CGCTCGGCCG CCGCCTCGAC TCCCGTTTCC CCTCGGACAA AGGCTCGAAG
GGCGTGCGCA TCCGCCGCGG CATTGGCCTG CGCGATATCG CCGACGTTTT CTGA
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| Protein sequence | MTFSPPDIPQ VLRQRKQWLV WRLVKKPDEP KPRKVPFYAN GAPRNGEQGT AEDLAQLTTF
DAAVHAVRER GYTGLGFAPI ANGGIVALDF DGCVSGGQIT DARIEALISD TYAEFSPSGT
GLRAFYLGAM ASRKDNAHKS KRVGGQAGAA RLDGLFDIEF FGHNGFVTVT GKATPDTQLW
GLQDTVAPLS QGVQQLYAQR FGDTGPLPAV GAVALAGEAN LAALGPEKLG WTMDQAREYL
FDCKASVSRA EWLNALMALH HEFDGSEDAL DLADEWSATG DSYAGRKDVE GRWDSFGRDR
GGAPITGRWL LSWRRDQMAA SNDERMRGAL AEMQRLLKEA PDMLTLQTRV MPDVSRLLLE
FPILEIEAYS LVAGRAKEFG LAINKTEFKK LIKVERPPAA AAVAPLTEFG NTERMLARYG
DSLMFCPDTA TWYVWTGVYW RTAMGGNTEV AHYAKETIKD LPSEAASHAD PGEFFAFCSL
SQRAAMVAAM VKLAESDPRV CVPSSELDKH RHLLGVKNGV VDLRTGVLMP ASPELRITLS
AGCEYNPGAK CPLFEQTLRD VFFDDLEMVE YVARTFGYAL QGQPREDMMF IAFGNGANGK
STIFNAVRKV FGGYARSADA ASFISDAMGG NAGGPREDLL RLRGARFVYV NEPDEGGELR
EGAVKAMTGG DAITARGIQA KHSIEIEPTW TVYMPTNHKP IIKGTDNGIW RRMGLLPFER
DFRNDPHIVK DDQRREKLEA ELPGILALIV RAGMRYRQSG LNPPAKVLAA SADYRKDMDL
LGEWIEECCE IDENLHTKVS DLWESWETYA RRRGLVRFIS SSKALGRRLD SRFPSDKGSK
GVRIRRGIGL RDIADVF
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