| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3392 |
|---|
| Symbol | |
|---|
| ID | 5748977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3728754 |
|---|
| End bp | 3729497 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641298496 |
|---|
| Product | ankyrin |
|---|
| Protein accession | YP_001564415 |
|---|
| Protein GI | 160898833 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0666] FOG: Ankyrin repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0097583 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTGA ATGCTGCGGT CGGTGGCCGC GTGGGCATGG GCGTGGACGT GCACCGGCGC
CACTGGCTGG CCCAGGCCGG CCAGGCCGTG GTGGCCCTGG CCGCAGCCAG CGGCGGGCTG
GCGCATGCCA GCCAGTACGA CGACTATGTG CGCGCCATCA TCAGCGACAA CGAGCGCGCC
ATGGTCAACC TGATCTTTCG CGGCTTCGAC CCCAACACCC GCGACACGCG CGGCCGCCCG
GGCCTGGTAG CGGCCCTGCA CCAGGGCTCA CTGGGCGTGT TCGACGTGCT GCTCAAATCC
CCGGGCATCA AGGTCAACGA GGCCTCCCAG CAGGGAGAAA CGCCGCTGAT GATGGCCTGC
ATCAAGGGCC ACCTGGACCT GGCCAAGGAA CTCATACGCC GGGGCGCCGA TGTCAACCGC
CCCGGCTGGA CGCCGCTGCA CTACGCCACC TCGGCCGACC TGCCCAAGAC GCTGGACATC
GTCAAGCTGC TGCTGGACAA CAGCGCCTAC ATCGACGCCG ACTCGCCCAA CGGCACCACC
CCTCTGATGC TGGCCGCCCA ATACAGCAGC GAAGCCGTGG TGGACCTGCT GATCAAGGAG
GGCGCCGACG TCGTCCTTCG CAACCAGCGC GGCTTCACCG CCGCCGACTT TGCCCGGCAG
GTGGACCGCC AATACATGGT GGACAAGCTC ACCAAGGCCA TCAAGGCCGA GCGCAAGACC
CAGCCTTCGC GCGGAAGCTG GTAG
|
|---|
| Protein sequence | MRLNAAVGGR VGMGVDVHRR HWLAQAGQAV VALAAASGGL AHASQYDDYV RAIISDNERA
MVNLIFRGFD PNTRDTRGRP GLVAALHQGS LGVFDVLLKS PGIKVNEASQ QGETPLMMAC
IKGHLDLAKE LIRRGADVNR PGWTPLHYAT SADLPKTLDI VKLLLDNSAY IDADSPNGTT
PLMLAAQYSS EAVVDLLIKE GADVVLRNQR GFTAADFARQ VDRQYMVDKL TKAIKAERKT
QPSRGSW
|
|---|
| |